Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2208 |
Symbol | |
ID | 5195499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2511264 |
End bp | 2512463 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640586665 |
Product | major facilitator transporter |
Protein accession | YP_001267531 |
Protein GI | 148547429 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCT CCCTTGCGAC AGCGCAACCG GCCGCCGCCA GCCTGAGCCG GGCTCTGGTA GTGCTGCTGG CGTTCTGCTG CGGCGCGATT GTCGCCAACA TCTACTACGC CCAGCCCATC GTCGGGCTGA TCGCCCCCGA CCTGGGGCTG TCCACCGAGC ATGCCAGCCT GATCGTTTCG CTCACGCAGT TGGGCTATGC CCTGGGCCTG TTATTGCTGG TGCCGCTGGC CGACCTGCTG GAAAACCGCC GCCTGATGGT GGCCACCGCG GTCCTGGCCT GCGTCAGCCT GCTGCTGGCG GGCACCAGCA GCAGTGGCCA GGGTCAGCTG TTCCTGGGTT ATGCATTGCT GATCGGCTTC AGTTCGGTGT CGGTGCAGAT GCTCATCCCG CTGGCGGCGC ATCTGGCGCC GGAACAGCAG CGTGGTCGTG TGGTCGGTAA CATCATGGGC GGCTTGCTGC TGGGCATCCT GCTGGCGCGA CCGCTGTCGA GCGTGGTGGC CGACCACTTC GGCTGGCGTG CGGTGTTCAT TGGCGCCGCC GGGGTAATGC TGGCGATCAT CCTGTTGCTG TCATTGACCT TGCCGCAGCG GCGGCCCGAG CACAAAGCCA GTTATGCCGG GCTGATGCTG TCGCTGCTCA CACTGCTGCG TCGTTATCCG CTGTTGCGCC AGCGTTCGTT GTACCAGGCA TTGATGTTTG CAGCGTTCAG CCTTTACTGG ACGGCAGTGC CGATGGCGCT TGCCGGTGAG CATGGCCTGT CACAAAGCCA GATCGCTGTG TTCGCCCTTG TCGGCGCGGT GGGTGCCGTT GCTGCGCCCA TGGCCGGCCG CCTGGCCGAT GCCGGGCATG CCCGGGCCGG CTCGCTGCTG GCGCTGTTGC TGGCGCCGGC GACCTTGTTG CTGGGGCTGA CAGTGCCGGG ATACAGCGTG ATTGGCCTGG GCCTTACCGG CGTGTTGCTG GACTTTGCGG TGCAGATGAA CATGGTCATC GGCCAGCGTG AAGTGTACGC ACTGGACCCT GCCAGCCGCG GGCGGCTGAA TGCGGTGTAC ATGACCAGCA TCTTCCTCGG CGGGGCGCTG GGGTCGGCGG TGGCCAGTGC GCTGTTCAGC CAGTTTGGCT GGCATGGCGT GGCACTGGTG GGGGCGGGGT TGCCGGGTGT GGCGCTGGTT GTGTTTCTAC TCAAAGCACG CCAGGGTTGA
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Protein sequence | MNPSLATAQP AAASLSRALV VLLAFCCGAI VANIYYAQPI VGLIAPDLGL STEHASLIVS LTQLGYALGL LLLVPLADLL ENRRLMVATA VLACVSLLLA GTSSSGQGQL FLGYALLIGF SSVSVQMLIP LAAHLAPEQQ RGRVVGNIMG GLLLGILLAR PLSSVVADHF GWRAVFIGAA GVMLAIILLL SLTLPQRRPE HKASYAGLML SLLTLLRRYP LLRQRSLYQA LMFAAFSLYW TAVPMALAGE HGLSQSQIAV FALVGAVGAV AAPMAGRLAD AGHARAGSLL ALLLAPATLL LGLTVPGYSV IGLGLTGVLL DFAVQMNMVI GQREVYALDP ASRGRLNAVY MTSIFLGGAL GSAVASALFS QFGWHGVALV GAGLPGVALV VFLLKARQG
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