| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2196 |
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| Symbol | |
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| ID | 5190473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2496244 |
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| End bp | 2498649 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586653 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001267519 |
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| Protein GI | 148547417 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.614035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAG TAAAAACTTG CCGCCTGCGC CCACTGGCGC GCGCAGCACA TCCATTGTTC
GCGATGAGCC TGCTGTTGTG TGCACCCGCC TGGGCCGATG AGCCGGCCCG GCGTACGTTC
CAGGTGGCGC CAGCCAGCCT GGGTGCCGCT TTGACCCATT TCGCCGACCA GGCCGGTGTC
AGCCTTTCGC TGGACCCGGC ATTGGTAGAG GGCCGGCAAA GTAACGGCTT GTCCGGTCGT
TACAGTGTCG ATGAAGGCTT CAACCAGTTG CTGCGCAGTA GCGGCCTGCA GGCGCTACCA
GTGGGTGAGG GGGCCTTCAC CCTGATGCCA GCCCCCCAGG CCAGTGGCGC GCTGGAAATC
GCCCCCACCC GCATTGTCGG CGGCCTGGCC GCAGGCAACG AAGCGCAGCC GTATGCCGGT
GGCCAAGTGG CACGCCAAGG GGCACAAGGT TTGCTCGGTT CGCGCGACTT CATGGAAACC
CCGTTCAGCA TCACCAGCTA CACCAGCGAC CTGGTCAAGA ACCAACAGGC GCGCACCTTG
GGCGAGCTGA TTGCCAGTGA CCCTTCAGTG CGTGCTACCA ACCCGGCGGG CGGGCGTTTC
GAGCAGTTCA CCATTCGCGG CTTCAGCCTG TTCAACAGTG ATGTGGCCTA CAACGGTCTT
TATGGCATCT TGCCGACGTA TTCGATCGAC ATGGAAATGG CCGACCGGGT CGACATCATC
AAAGGCCCCA GCCAGTTGAT CAATGGCATA TCGCCGCGTG GCAGCGTGGG CGGCGGTATC
AATGTGCAGC CCAAGCGAGC CGCTGACAAG CCGATCACCG AGTTCACCGG CAGCTACGCC
TCGGCCGGCC AGGCTGGCGG CGCCGTGGAC ATCGGCCGTC GCTTTGGTGA AGGCCAGCAG
TTCGGCGTGC GCTTCAATGG GGTGAAGCAG GCCGGTGATA CCGAATGGGA CCACCAGCGC
GTCGACCGCG AAATGGCGGT GCTGGGCCTG GATTTTCGAG GCGAGCGCCT GCGTCTCTCG
GCAGACCTTG GCCACACCGA GCGCGATACC GACGCCCCGC AGGAACGTGT GCTGGTCGGT
GCCAATGCCA AGGTGCCCAA TGCCAATGAC GTACGCCACA ACTACGCCCA GGCCTGGAGC
AAGGCGCGTA CCAACGACAC CTTCGGTGCG CTGAACGCCG AGTACGATAT CAGCGAATCG
CTGCTGGCCT ATGGTGCGGT CGGTGCGCGC AAGAGCAACC ACGACTTCCT GCGCCATAAC
GTGTCGATCA CCAACGATGC TGGCGACTTC ACCGTGCAGC CGCGTGACTT TACCCGGGAC
GAGTCGGTGC GCACCGCCAT GGCCGGTTTA CGTCACTGGT TCCATACCGG GCCGGTCAGC
CACGCGCTGA ACCTGGCCGC CAGCTATTAC TACATGGACT TCACCAACGG CGGGGCGCGC
TATGCCGCGG CGCCGAGCAA CCTCTACAAC CCGGTGGCCG CACCGACACC CGGTACGCCA
ACCCGCCTCG ACCCCGAGGT CTACACGGAA AACCGCTTCT CCGGCGTGGC CCTGGCCGAC
ACCCTTGGCT TTTTTGACGA CCGCCTGCTG TTGACCCTGG GTGCGCGCTG GCAACGGGTG
CAGGTGGATG ACTGGAGCGA CGGCGTCAAA GGCGATACGG GCTATGACGA AGAAAAAGTC
TCGCCTTCTG GGGGCGTATT GCTCAAGGTC ACCGACCAGC TCTCGTTGTA TGCCAACTAC
ATGGAGGGCC TGAGCCAAGG CAAGATCGCC CCCTCGACCT CGATCAACGA AGACCAGATC
TTCCCGCCGT TCACCAGCCG CCAGATCGAG GTGGGGGCCA AGTACGACCT CGGCCAGGTG
GCCTTTACTG CCAGCGCCTT CCGCATTCGC CAGCCGGCCT ACGAGACCAA CCCCGCCTCG
CGGGTGTTCG GCCCCAATGG CAAGCGTGAC AACCGCGGCA TCGAGCTGAG TGTGTTCGGT
GAGCCGGTGC AAGGCGTGCG GGTGTTGGGT GGGGTGATGT ATATCGACAG CGAGCTGACC
GACACCGTCG GCGGTGCCTA CGATGGCAAC CGTGCGCCGG CCACGCCCGA ATACAACGTC
AATCTGGGGG CTGAATGGGA CGTGCCAGGG GTGAACGGCC TGACCTTCAC AGCGCGCGGC
ACTCACTCCA GCTCGCAGTA CCTGGACCAG AACAACAGCA AACGCATCGA CGGCTGGGAG
CGTTATGACC TGGGAGCACG TTATGCCTTC AAGGTAAACG CCACCGAGGT TACCTTACGG
GCCAGTGTCG AGAATGTGCT CGATGATCGC TACTGGAGCT CGGCAGGGGC GTCGGATGAC
AGTGAGCCGG GGTTGTCCCT GTCCACCCCG CGGACCTATC TGCTCTCGGC CACGGTCGGC
TTTTAA
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| Protein sequence | MPAVKTCRLR PLARAAHPLF AMSLLLCAPA WADEPARRTF QVAPASLGAA LTHFADQAGV
SLSLDPALVE GRQSNGLSGR YSVDEGFNQL LRSSGLQALP VGEGAFTLMP APQASGALEI
APTRIVGGLA AGNEAQPYAG GQVARQGAQG LLGSRDFMET PFSITSYTSD LVKNQQARTL
GELIASDPSV RATNPAGGRF EQFTIRGFSL FNSDVAYNGL YGILPTYSID MEMADRVDII
KGPSQLINGI SPRGSVGGGI NVQPKRAADK PITEFTGSYA SAGQAGGAVD IGRRFGEGQQ
FGVRFNGVKQ AGDTEWDHQR VDREMAVLGL DFRGERLRLS ADLGHTERDT DAPQERVLVG
ANAKVPNAND VRHNYAQAWS KARTNDTFGA LNAEYDISES LLAYGAVGAR KSNHDFLRHN
VSITNDAGDF TVQPRDFTRD ESVRTAMAGL RHWFHTGPVS HALNLAASYY YMDFTNGGAR
YAAAPSNLYN PVAAPTPGTP TRLDPEVYTE NRFSGVALAD TLGFFDDRLL LTLGARWQRV
QVDDWSDGVK GDTGYDEEKV SPSGGVLLKV TDQLSLYANY MEGLSQGKIA PSTSINEDQI
FPPFTSRQIE VGAKYDLGQV AFTASAFRIR QPAYETNPAS RVFGPNGKRD NRGIELSVFG
EPVQGVRVLG GVMYIDSELT DTVGGAYDGN RAPATPEYNV NLGAEWDVPG VNGLTFTARG
THSSSQYLDQ NNSKRIDGWE RYDLGARYAF KVNATEVTLR ASVENVLDDR YWSSAGASDD
SEPGLSLSTP RTYLLSATVG F
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