| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2190 |
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| Symbol | |
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| ID | 5190437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2489512 |
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| End bp | 2491599 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586647 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001267513 |
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| Protein GI | 148547411 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCG GTAGCTACTC CTCTTCGCTG GTGTTGATTT CGCTGTGCGT GGCAATCCTG
GCATCCTATA CCGCCCTTGA CCTGACCGGC CGCATCGCCA CGGCCAAGGG CCGCGCTGCC
TGCCTGTGGA TGGGCGGCGG TGCGTTGGCC ATGGGCATCG GCGTGTGGTC GATGCACTTC
ATTGGCATGC TTGCCTTCAG CTTGCCCATC GACTTGGGGT ACGACCTGGC CCTGACCGCG
TTCTCGCTGC TGATCGCTGT GCTGTCCTCG GGCTTTGCCT TGTGGCTGGT CAGTCAGCCG
AGCCTGCCAG CGCTGCAGTT GGGGTTCGGT GCGCTGATCA TGGGCGCCGG TATCGCCTGC
ATGCACTACA CCGGCATGGC CGCGCTGCGG ATGCTGCCAG GCATCGATTA CGACCCGACG
TTGTTCGGCG CTTCGCTGCT GATTGCCGTA GGCGCCTCGG CGGCGGCATT GTGGATTGCC
TTCCGCCTGC GCACACACAC ACCCTATATA CGGCAGATCC GCGGCCTGGC GGCGGTGGTC
ATGGGCGTTG CCATCGTGGG CATGCATTAC ACCGGCATGG CAGCGGCAAA CTTCCCCGAG
GGCAGCTTCT GCGGCGCGCT GGGGGGCGGG TTGCAGGGGG ACAGCCTGGT TTACCTGGTG
CTGATCACCA CGCTGGCAGT ACTGGCAGTG GCTTTGCTGA CTTCGGTGCT GGACGCGCGT
CTCGAGGCGC GTACTGCCGA GTTGGCCCGT TCGCTGACCT TGGCCAACCA GGAACTGACC
CAACTGGCCT TGCACGACAC CCTCACCGAT CTGCCCAACC GTACCCTGCT GGCGGACCGC
ATCGAACAGG CCATCGCCAA AGTGGCGGAG CAGGGTGGTT GTTTTGCCCT GATGTTCATT
GATCTGGACG GCTTCAAACC CGTCAACGAT GCCTTTGGCC ATCATATCGG TGACCTTCTG
CTCAAAGCGG TAGCGGCCCG CCTGCGCGGC CACCTGCACA GCCAGGACAC GCTGGCACGG
ATTGGCGGCG ACGAATTCGT GCTGCTGGTG GAACTGCAGG AGCCGAACGA TGCCATGGAC
GTGGCGGTCA AGCAGGTCAA CCTGGTGTCC CGGCCTTTCC GCGTCGCCGA GCACGACCTG
CAACTGTCGG CGAGCCTGGG CATCGTTCTG TACCCGGGCA ACGGCCAGGA CCAGCATGAG
CTGCTGCGTA ACGCCGACGC TGCCATGTAC CATGCCAAGA GCGCCGGCAA GAACGGTTAC
AGCTTCTTCG ATGTGTCGAT GAACAGCAAC GCGCGCCAGC AGTTGCAGCT GCTGCAGGAC
TTGCGCCTGG CGCTTGAGCA GCGCCAGTTC CGCTTGCATT ATCAGCCCAA GTTCGACGCC
CAGGTCTGCC AGCCGATCGG TGCCGAAGCG TTGCTGCGCT GGGAGCACCC GCAGCAGGGC
CTGCTGCTGC CTGACCGCTT CATCGGCCTG GCAGAAAAGA CCGGCCTGAT CATCCCCATT
GGTGAGTGGG TACTCACTGA GGCCTGCCGT CAGATGCGTC AGTGGCTGGA TCAGGGGCAC
CATGGCTGGC GCATGGCGGT GAACCTGTCG GCCATCCAGT TCTGCCATGC CGGTCTGGTC
GACAGCGTGG CCCGCGCCCT GCAGCAGAAC GGCTTGCCAG CCAACTGCCT GACACTGGAA
ATTACCGAAA CCACCGCCAT GCACGATGCC GACGCCAGCC TGACCGTGCT GCAGCGCCTG
TCCGACATGG GCGTGGACTT GTCCATTGAT GACTTTGGTA CGGGCTATTC CAGCCTGATG
TACCTCAAAC GCCTGCCAGC CAACGAGCTG AAAATCGACC GCGGTTTCGT ACGCGACCTG
GAGCAGGACA GTGACGATGC AGCGATTGTT TCGGCAATTG TCGCACTGGG CCAGGCGTTA
GGCCTGCGTA TCGTTGCCGA GGGGGTTGAA ACCGACAAAC AGCAGGACTT CCTGACCCGT
CTGGGGTGTG ATTCGTTGCA GGGCTACCTG CTGGGCCAGC CCGTGCCGGC CGAGCAGTTT
ATGAGCAAGT TGCAGGCCAT GGGCCCGGAA CTCACTGCTG CGGGCTAG
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| Protein sequence | MLTGSYSSSL VLISLCVAIL ASYTALDLTG RIATAKGRAA CLWMGGGALA MGIGVWSMHF
IGMLAFSLPI DLGYDLALTA FSLLIAVLSS GFALWLVSQP SLPALQLGFG ALIMGAGIAC
MHYTGMAALR MLPGIDYDPT LFGASLLIAV GASAAALWIA FRLRTHTPYI RQIRGLAAVV
MGVAIVGMHY TGMAAANFPE GSFCGALGGG LQGDSLVYLV LITTLAVLAV ALLTSVLDAR
LEARTAELAR SLTLANQELT QLALHDTLTD LPNRTLLADR IEQAIAKVAE QGGCFALMFI
DLDGFKPVND AFGHHIGDLL LKAVAARLRG HLHSQDTLAR IGGDEFVLLV ELQEPNDAMD
VAVKQVNLVS RPFRVAEHDL QLSASLGIVL YPGNGQDQHE LLRNADAAMY HAKSAGKNGY
SFFDVSMNSN ARQQLQLLQD LRLALEQRQF RLHYQPKFDA QVCQPIGAEA LLRWEHPQQG
LLLPDRFIGL AEKTGLIIPI GEWVLTEACR QMRQWLDQGH HGWRMAVNLS AIQFCHAGLV
DSVARALQQN GLPANCLTLE ITETTAMHDA DASLTVLQRL SDMGVDLSID DFGTGYSSLM
YLKRLPANEL KIDRGFVRDL EQDSDDAAIV SAIVALGQAL GLRIVAEGVE TDKQQDFLTR
LGCDSLQGYL LGQPVPAEQF MSKLQAMGPE LTAAG
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