| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2187 |
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| Symbol | |
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| ID | 5194788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2481692 |
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| End bp | 2484790 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586644 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001267510 |
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| Protein GI | 148547408 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CGCGCCTGTT CATCCTGCGC CCGGTCGCCA CCACGCTGAG CATGCTGGCC
ATCGTGCTGG CTGGCCTGAT CGCCTACAAG TTGCTGCCGG TTTCCGCCTT GCCGCAGGTG
GATTACCCGA CCATTCGCGT CATGACCCTG TACCCCGGCG CCAGTCCGCA GGTGATGACC
AGCGCTGTCA CCGCGCCACT GGAGCGCCAG TTCGGCCAGA TGCCGGGCCT GGAACAGATG
GCCTCGACCA GTTCTGGCGG CGCGTCGGTG CTGACCTTGC GTTTCAACCT CGACATGAAC
ATGGACGTTG CCGAGCAGCA GGTGCAGGCC GCGATCAACG CCGCCAGCAA CTTGTTGCCC
AGTGACCTGC CGGCACCGCC GGTGTACAAC AAGGTCAACC CGGCCGACAC CCCGGTGCTG
ACCCTGGCCA TCTCCAGCAA GACCATGCCG CTGCCCAAGC TCAACGACCT GGTCGATACC
CGCGTGGCGC AAAAGCTGGC GCAAATCAGC GGCGTGGGCA TGGTCAGCAT TGCCGGTGGC
CAGCGCCAGG CGGTACGCAT CAAGGTCAAC GTCGACGCCC TGGCGGCCAA TGGCTTGAAT
CTGGATGACG TGCGCACGCT GATCGGTGCC TCCAACGTCA ACCAGCCCAA AGGCAACTTC
GACGGCCCGA CCCGGGTGTC GATGCTCGAT GCCAACGACC AGCTGCGTTC TCCCGAGGAA
TACGCCAACC TGATCCTGGC CTACAACAAC GGTGCGCCGC TGCGCCTGAA AGATGTGGCC
GAAATCGTCG ACGGCGCCGA GAACGAGCGG CTGGCCGCCT GGGCGAACGA GAACCATGCT
GTGCTGCTGA ACATCCAGCG TCAGCCGGGC GCCAACGTGA TCGAAGTGGT CGACCGCATC
AAGGGCCTGC TGCCGTCGAT CACCGACAAC CTGCCGGCCG GCCTCGATGT CTCGGTGCTG
ACCGACCGCA CCCAGACCAT TCGTGCCGCG GTCAAGGACG TGCAGCACGA ACTGCTGATC
GCCATCGTTC TGGTGGTGAT GGTCACCTTC GTTTTCCTGC GCCGCTTGAG CGCCACCCTC
ATCCCGTCGA TTGCCGTGCC ACTGTCGCTG ATCGGGACGT TCGGGGTCAT GTACCTGGCC
GGGTTCTCGG TCAACAACCT GACACTCATG GCCCTGACCA TCGCCACCGG CTTTGTGGTC
GATGATGCCA TCGTCATGCT GGAGAACATC TCCCGGCATA TCGAAGAGGG CGAGACGCCC
ATGCAGGCGG CGCTCAAGGG TGCCAGGCAG ATTGGCTTCA CCCTGATTTC GCTGACCTTC
TCGCTGATTG CGGTCCTGAT CCCGTTGCTG TTCATGGCGG ACGTGGTCGG TCGCCTGTTC
CGCGAGTTCG CCATCACGCT GGCAGTCGCC ATTCTGATTT CCCTGGTGGT GTCCCTGACC
CTGACACCGA TGATGTGCGC GCGTCTGCTC AAGCGCGAGC CCAAGGAAGA AGAACAAGGC
CGCTTCTACC GTGCCAGCGG CGCCTGGATC GACTGGCTGA TCAAGCACTA CGGCAGCGCC
CTGCAGTGGG TGCTCAAGCA TCAGCCGCTG ACCTTGCTGG TGGCGGTGGC CAGCCTGGTG
CTCACGGTGT TCCTGTACAT GGTCGTGCCC AAGGGCTTCT TCCCGGTGCA GGACACGGGG
GTGATCCAGG GTATTTCCGA AGCGCCGCAG TCCACCTCGT TCGCCGCCAT GAGCGAACGT
CAGCAGGCCC TGAGCAAGGT CATCCTGCAA GACCCGGCCG TGCAAAGCCT GTCGTCCTAC
ATTGGCGTAG ACGGCGACAA CGCCACGCTC AACAGTGGTC GCCTGCTGAT CAACCTCAAG
CCCCACGGCG AGCGCGATGT CAGCGCCAGC GAAGTGATCA GCCGCCTGCA GCCACAGGTC
GACCGGCTGG TGGGCATCCG CCTGTTCATG CAGCCGGTGC AAGACCTGAG CATCGAGGAC
CGGGTCAGCC GGACCCAGTA TCAGTTCAGC CTGTCGTCGC CGGACGCCGA CCTGCTGGCG
CAGTGGAGTG GCAAGCTGGT GCAGGCGCTG CAGCAGCGTC CGGAACTGGC CGATGTGGCC
AGCGACCTGC AGGACAAGGG CTTGCAGGTG TACCTGGTCA TCGACCGTGA CATGGCCAGC
CGCCTGGGGA TCAGCGTGTC GCAGATCACC AATGCCCTGT ACGACGCCTT CGGCCAGCGG
CAGATCTCGA CCATCTACAC TCAGGCCAGC CAGTACCGCG TGGTGTTGCA GTCCAAGGAC
GCCGCCACGA TCGGCCCGCA GGCGCTGGAG TCGATCCACG TCAAGGCCAC CGATGGCGGC
CAGGTGCGCC TTTCGGCGCT GGCGCGGATC GAGCAGCGTC AAGCCCAGCT GGCTATTTCC
CACATCGGCC AGTTCCCGGC AGTGACCTTG TCGTTCAACC TGGCTCACGG CGCGTCGCTG
GGCGAAGCCG TGCAGGTGAT CGAGCAGGTG CAGCAGGACA TCGGCATGCC GCTGGGTGTG
CAAACCCGAT TCCAGGGTGC GGCCGAGGCC TTCCAGGCAT CGTTGTCGAG CACCTTGCTG
CTGATTCTGG CGGCGGTGGT GACCATGTAC ATCGTGCTGG GGGTGCTGTA CGAAAGCTAC
ATCCACCCGA TCACCATCCT CTCGACCCTG CCGTCAGCGG CGGTCGGCGC CTTGCTGGCC
TTGCTCATCA GCGGTAACGA CCTGGGCATG ATCGCCATCA TCGGCATCAT TCTGCTGATC
GGTATCGTCA AGAAGAACGC GATCATGATG ATCGACTTCG CCCTGGAGGC CGAGCGCCAT
CAGGGCATGA GCCCGCGCGA TGCCATCTAC CAGGCGGCGC TGCTGCGCTT CCGGCCGATC
CTGATGACCA CCCTGGCCGC GCTGTTTGGT GCGGTGCCGC TGATGCTTGC CACCGGTTCC
GGCGCCGAGC TGCGCCAGCC ACTGGGCCTG GTGATGGTCG GCGGGTTGCT GGTCAGCCAG
GTGCTGACGC TGTTCACCAC CCCGGTCATC TACCTGTACT TCGATCGCCT GGCCCGCCGC
CTGCGCCCGG CCACAGACGT GAAGCAGGCC CAGGCATGA
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| Protein sequence | MNLSRLFILR PVATTLSMLA IVLAGLIAYK LLPVSALPQV DYPTIRVMTL YPGASPQVMT
SAVTAPLERQ FGQMPGLEQM ASTSSGGASV LTLRFNLDMN MDVAEQQVQA AINAASNLLP
SDLPAPPVYN KVNPADTPVL TLAISSKTMP LPKLNDLVDT RVAQKLAQIS GVGMVSIAGG
QRQAVRIKVN VDALAANGLN LDDVRTLIGA SNVNQPKGNF DGPTRVSMLD ANDQLRSPEE
YANLILAYNN GAPLRLKDVA EIVDGAENER LAAWANENHA VLLNIQRQPG ANVIEVVDRI
KGLLPSITDN LPAGLDVSVL TDRTQTIRAA VKDVQHELLI AIVLVVMVTF VFLRRLSATL
IPSIAVPLSL IGTFGVMYLA GFSVNNLTLM ALTIATGFVV DDAIVMLENI SRHIEEGETP
MQAALKGARQ IGFTLISLTF SLIAVLIPLL FMADVVGRLF REFAITLAVA ILISLVVSLT
LTPMMCARLL KREPKEEEQG RFYRASGAWI DWLIKHYGSA LQWVLKHQPL TLLVAVASLV
LTVFLYMVVP KGFFPVQDTG VIQGISEAPQ STSFAAMSER QQALSKVILQ DPAVQSLSSY
IGVDGDNATL NSGRLLINLK PHGERDVSAS EVISRLQPQV DRLVGIRLFM QPVQDLSIED
RVSRTQYQFS LSSPDADLLA QWSGKLVQAL QQRPELADVA SDLQDKGLQV YLVIDRDMAS
RLGISVSQIT NALYDAFGQR QISTIYTQAS QYRVVLQSKD AATIGPQALE SIHVKATDGG
QVRLSALARI EQRQAQLAIS HIGQFPAVTL SFNLAHGASL GEAVQVIEQV QQDIGMPLGV
QTRFQGAAEA FQASLSSTLL LILAAVVTMY IVLGVLYESY IHPITILSTL PSAAVGALLA
LLISGNDLGM IAIIGIILLI GIVKKNAIMM IDFALEAERH QGMSPRDAIY QAALLRFRPI
LMTTLAALFG AVPLMLATGS GAELRQPLGL VMVGGLLVSQ VLTLFTTPVI YLYFDRLARR
LRPATDVKQA QA
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