| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2186 |
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| Symbol | |
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| ID | 5194787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2480388 |
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| End bp | 2481695 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586643 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001267509 |
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| Protein GI | 148547407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGT CCAATTCCCG TTCCCTTCGT CGCTGGCTCG TCGGCCTGCT GATCCTGCTG
CTGGTGGCTG CACTGGCCTG GTGGCTGTGG CCCGCAGCGA CGCCTGCGCA TAAAGAAGCC
AGTGGCATGC GCGGTGGCAA GGGCATGGGC ATGATCGGCG GCCGCCCAGG TTTTGGCGGC
TCCAGTGACC CGGTACCCGT ACGTGTCGTG CCGGTGCGGA CAGGCGACTT CCCCCTCTAC
TACAAAGCCT TGGGCACGGT CACCGCGACC AATACGGTCA ATGTGCGCAG CCGCGTGGCT
GGCGAACTGG TGAACATCCA CTTCAAGGAA GGCCAGCGCG TCAAGGCTGG CGACCTGCTG
GCCGAAATCG ACCCGCGCCC TTATCGCATC GCCCTGCAGC AGGCCGAAGG CACCTTGGCG
CAGAACCAGG CGCAGTTGAA GAATGCTCAG GTCGACCTGG CCCGCTATAA AGGCCTGTAC
GCCGAAGACA GCATCGCCAA GCAAACCCTG GACACTGCCC AAGCCCAGGT TGCGCAGTTC
CAGGGGCTGG TCAAGACCAA TCAGGCACAG GTCAACGACG CCCGCCTGAA CCTCGATTTC
ACCCAGATCC GTGCGCCGAT CAGTGGCCGT GTGGGCCTGC GCCAGCTCGA TCTGGGCAAC
CTGGTGGCCG CCAACGACAC CACCGCGCTG GTGGTCATCA CCCAAACCGA GCCGATCAAC
GTCGCCTTCA CCCTGCCGGA AACCGAACTG AGCACTGTGC TGGAGCGCTA CCGCAGTGGC
GCCAGCCTGC CGGTCGAGGC CTGGGACCGC GGTGACAGCA AGCTGCAGTC CACCGGTGTG
CTGGGCAGCA TCGACAACCA GATCGACACC ACCACCGGCA CGCTGAAGTT CAAAGGCCGC
TTCGAGAACA AGGACCTGGC CCTGTTCCCC AACCAGTTCG TCAACGTGCG CTTGCTGGCC
GACACCCTCA AGCAGGTGGT CATGGCCCCG GCCGCGGCCA TCCAGTTTGG CAACGATGGC
ACCTTTGCCT ATGTGGTCAA CGAGAAGAGC ACCGTCAATG TCCGCAAGCT CAAGGTGGGC
GCCAGCGATG GCGAGAACAG CGTCATTCTC GACGGCTTGA AGGCCGGCGA TCGCCTGGTG
CTGGAAGGCA CCGACCGCCT GCGCGAAGGC ACCCAGGTGG AAGTGGTCGA AGACAGCTCG
CAAGTGCCGA CCACCCCGGG CCAGCATCTG CAAGGGCAGG AAACCAAGGG CGCGGCGCAA
ACAGATGAAG CACAACCTGG CAACGCAGCA GGCAAGGCGG GCGCATGA
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| Protein sequence | MQASNSRSLR RWLVGLLILL LVAALAWWLW PAATPAHKEA SGMRGGKGMG MIGGRPGFGG
SSDPVPVRVV PVRTGDFPLY YKALGTVTAT NTVNVRSRVA GELVNIHFKE GQRVKAGDLL
AEIDPRPYRI ALQQAEGTLA QNQAQLKNAQ VDLARYKGLY AEDSIAKQTL DTAQAQVAQF
QGLVKTNQAQ VNDARLNLDF TQIRAPISGR VGLRQLDLGN LVAANDTTAL VVITQTEPIN
VAFTLPETEL STVLERYRSG ASLPVEAWDR GDSKLQSTGV LGSIDNQIDT TTGTLKFKGR
FENKDLALFP NQFVNVRLLA DTLKQVVMAP AAAIQFGNDG TFAYVVNEKS TVNVRKLKVG
ASDGENSVIL DGLKAGDRLV LEGTDRLREG TQVEVVEDSS QVPTTPGQHL QGQETKGAAQ
TDEAQPGNAA GKAGA
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