| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2180 |
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| Symbol | |
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| ID | 5190369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2472915 |
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| End bp | 2473787 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586637 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001267503 |
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| Protein GI | 148547401 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.417228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC TGATCAAGCA ACGCCTGGAA AACAGCCTCG AAGGGGCCGC TGCCTCGGGT
CGCAAGATCG CCACCTACAT GCTTGCCAAC CTGCACGAAC TGCCGTTCCA GACCTCGGCC
AGCATTGCCG CCAAGCTGGG CGTCAGCGAA TCCAGCGTCG GGCGCTACTG TCGCTCACTG
GGTTATGCCC ACCTCAAGGC GCTTAAGCAA GACCTGCAGA ACGATCTGGG CGATGGCCCG
TGGCTGGTAG GTGATCGTCT GCAAGATTAC CGCCAGAACC AGGACGCCAG CGACAACGCC
GGCAGCCTGG AGCTGGAAAT CGCCGCCCTG GTGCGCGTAC ACGAATACCG CCAGAGCCCC
GCCTGGCACA ACGTGGCGCA ACGCCTGGCC AGCAAGCCAC GGGTGTTCAT CGCCGGCTTC
CAGACCGAGC GCGGCATCGC CATGTGCATG AGCCACCTGC TGCAATACCT GCGCGATGGC
GTGCAACTGG TGGACATCAG CGCCGGGCAC TTCGGCGAAG TGCTGCTGGG CCGCGCCGAA
GACAGCGCCC TGGTGGTGTT CGAGGCGCGC CGTTATTCCC GCCATGCCCT GATGCTGTGC
CAGAAGGCGC GCGAGGCTGG CATTGCGGTC ACCCTGGTGA CCGACACCTT CTGTGACTGG
GCGGATGCCA ATGCCGACGA GGTGTTCCGC ATCCCCACCG AATTCAACCT GTTCTGGGAA
TCCACCTCGA CGATGCTGTC GTGGGTGCAT CTGATGGTCA ACGAGGTCTG CAAGAAGCTC
GGACCGGATG TTGAAAAACG CTTGGAAGCA ACTGCCGCTC TACATAACGA ATTCGTCGGC
TACACCTCGT GGTCGACGGG CAAACAACAA TAG
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| Protein sequence | MSQLIKQRLE NSLEGAAASG RKIATYMLAN LHELPFQTSA SIAAKLGVSE SSVGRYCRSL
GYAHLKALKQ DLQNDLGDGP WLVGDRLQDY RQNQDASDNA GSLELEIAAL VRVHEYRQSP
AWHNVAQRLA SKPRVFIAGF QTERGIAMCM SHLLQYLRDG VQLVDISAGH FGEVLLGRAE
DSALVVFEAR RYSRHALMLC QKAREAGIAV TLVTDTFCDW ADANADEVFR IPTEFNLFWE
STSTMLSWVH LMVNEVCKKL GPDVEKRLEA TAALHNEFVG YTSWSTGKQQ
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