| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2177 |
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| Symbol | |
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| ID | 5191538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2470562 |
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| End bp | 2471272 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586634 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001267500 |
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| Protein GI | 148547398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0363854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG ATCAACTGCT GGCAATGGTG CTTGACCCCG ACCTGCTGGA ACGCTACGGC
CCGCGCTTCA TCGACGGCCT GCTGGTAACC GCCAAGCTGG TGGCGATTTC CTTCAGCCTG
GGTGCTGTGC TCGGCCTTCT GCTGGCCCTT GCCCGCCTGT CTCGCAGCCT GGTACTGCAG
CGCATGGCAG CTGGCTACGT GTACTTCTTC CGCGGCTCGC CGCTGCTGGC GCAATTGTTC
CTGCTGTATT ACGGCCTGGG CTCGCTCAAG GGCTTCTGGC AGGACGTCGG CCTGTGGTGG
TTCTTCCGGG ATGCGTGGTT TTGCACCTTG CTGGCGTTCA CCCTGAACAC TGCCGCCTAC
CAGGCCGAGA TCTTCCGCGG CAGCCTGATG GCGGTTGCGC CTGGCCAGCA TGAAGCGGCG
CGGGCGCTGA ACCTGAAGCG CTCGACCACG TTCTTCAAGG TGATATTGCC GCAGTCGCTG
CTGGTAGCCA TTGGCCCGTT GGGCAACGAA CTGATCCTGA TGATCAAGGC CAGCGCGATC
GCCTCGCTGG TGACGATCTA CGACCTGATG GGCGTGACCA AACTGGCCTT CTCGCGCAGT
TTCGACTTCC AGATCTACCT GTGGGCCGCC GTGCTCTACC TGGTGATCGT CGAACTGGTG
CGGCGCCTGC TGAAACACCT GGAAGCCCGC CTGGGCCGCC ACCTGAACTG A
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| Protein sequence | MSFDQLLAMV LDPDLLERYG PRFIDGLLVT AKLVAISFSL GAVLGLLLAL ARLSRSLVLQ
RMAAGYVYFF RGSPLLAQLF LLYYGLGSLK GFWQDVGLWW FFRDAWFCTL LAFTLNTAAY
QAEIFRGSLM AVAPGQHEAA RALNLKRSTT FFKVILPQSL LVAIGPLGNE LILMIKASAI
ASLVTIYDLM GVTKLAFSRS FDFQIYLWAA VLYLVIVELV RRLLKHLEAR LGRHLN
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