| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2176 |
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| Symbol | |
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| ID | 5191537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2469301 |
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| End bp | 2470545 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640586633 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001267499 |
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| Protein GI | 148547397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0832957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTGCC AGACCCTTGT CCTCGGCGCC GGCATCGTCG GCGTCAGCAC CGCGCTGCAC
CTACAGGCAC GCGGGCGCCA GGTAATTCTG ATCGACCGCG ACGAACCGGG CAGCGGCACC
AGCCACGGTA ACGCCGGGCT GATCGAGCGC TCCAGTGTCA TCCCCTATGC CTTCCCGCGG
CAACTCGGCG CACTGCTGCG CTACGGCCTG AACCGCCAGC CCGATGTGCG CTACAGCCTG
GCGCACCTGC CCAAGGCCGC ACCGTGGCTG TGGCGTTACT GGCGCCAGTC GGCACCCGGG
CGCCTGGCCG GCGCCGCCGC CGATATGTTG CCGCTGGTGC AGCGCTGTGT CGACGAGCAT
GACGCGCTGA TCGCTGCCGC CGGCCTGGAG GGCCTGGTGC AAGCCAAAGG CTGGATCGAA
GTGTTCCGCG ACCCCGCGCT GTTCGAGCAG GCAAAAACCG ATGCCAAGGG CCTGAGCCGC
TACGGCTTGC GGTTCGAAAT CCTTGAATGC GGGCAGCTGC AGGCACGTGA ACATCAGCTG
GACGCCACCG TGGTCGGTGG CATCCACTGG CTCGACCCGA AAACCGTGAA CAACCCCGGC
GCGCTCACCC GTGGCTATGC GGCGCTGTTC CTGCAGCGCG GCGGGCAGTT CGTGCATGGC
GATGCGCGCA GCCTGCGCCA GGCCAATGGC CAATGGCGGG TAGAGAGCCA GCGTGGCCCG
ATCACTGCCG ACGAGGTGGT GGCCTGCCTT GGGCCTCAGT CAGCCGACCT GTTCAGCGGC
CTGGGCTACC AGATCCCGCT GGCCATCAAG CGGGGCTACC ACATGCACTA CAGCACCCGT
GACGGCGCTC AGCTGGAGCA CTCGATCTGC GACACCCAAG GCGGCTATGT ACTGGCGCCG
ATGGCGCGCG GCGTGCGCCT GACCACCGGC ATCGAGTTCG ACGCAGCCAG CGCGCCTGGC
AATCAGATTC AGCTGGGCCG CTGCGAGGCC TTGGCGCGCA AGCTGTTCCC GGCCCTCGGC
GATCGTCTGG ACGACACGCC ATGGCTGGGC CGCCGCCCCT GCCTGCCCGA CATGCGTCCG
GTGATCGGGC CGGCGCCGCG CCACCCAGGG CTGTGGTTCA ACTTCGGCCA TGCCCATCAC
GGCCTCACGC TGGGCCCGGT CTGCGGCCGG CTGCTGGCCG AGCTGCTCAC TGGCGAGCCC
CCCTTCACCG ACCCCGCGCC TTACAGCGCG ACCCGTTTCG ACTGA
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| Protein sequence | MHCQTLVLGA GIVGVSTALH LQARGRQVIL IDRDEPGSGT SHGNAGLIER SSVIPYAFPR
QLGALLRYGL NRQPDVRYSL AHLPKAAPWL WRYWRQSAPG RLAGAAADML PLVQRCVDEH
DALIAAAGLE GLVQAKGWIE VFRDPALFEQ AKTDAKGLSR YGLRFEILEC GQLQAREHQL
DATVVGGIHW LDPKTVNNPG ALTRGYAALF LQRGGQFVHG DARSLRQANG QWRVESQRGP
ITADEVVACL GPQSADLFSG LGYQIPLAIK RGYHMHYSTR DGAQLEHSIC DTQGGYVLAP
MARGVRLTTG IEFDAASAPG NQIQLGRCEA LARKLFPALG DRLDDTPWLG RRPCLPDMRP
VIGPAPRHPG LWFNFGHAHH GLTLGPVCGR LLAELLTGEP PFTDPAPYSA TRFD
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