| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2172 |
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| Symbol | |
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| ID | 5193420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2464964 |
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| End bp | 2466901 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586629 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001267495 |
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| Protein GI | 148547393 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGCA CATCAACCAG ACCTTCACCG GGGTCGCCAT TGCCCGCAAC CGGCCTCCTG
TCGGTCGCTG AACTGCAGGC CGAGCTGACC CGGCTGCAGC ACCAGAACCA CAAGCTGCAG
CGTATCAATG ACGCACTGAT CGAGCGCATC GAGTCGGGCG TGACCCGGGG CAACGACCCA
TACGCCGCGT TCCAGCATTC AGTGGTGCTG GCCGAGCAGG TGCGCGAACG CACCGATGCG
TTGAACCAGG CCATGGCCGA GCTCAAGGCC GTCAACCGCC TGCTCAGCGA GGCCCGGCAG
CGGGCCGAGA CGGCCCATCA GCACCAGATT CGCCTGATTA CCGACAACGT CCCGGCGCTG
ATCGCCTACC TGAACGCCGA TCTGGTCTAC GAATTCACCA ACAAGGTTTA CGAAGAATGG
TATTGCTGGC CGCATGGCGT GATGCTGGGC CAGAGCCTGC GCGAGGCCCA CAGCGAGCAG
CATTACCAGC GCCTGGAAGG CTACGTGGCG CGGGCGCTGG CGGGGGAGAG CGTAACGTTC
GAGTTTGCCG AGACCAATAT CAACGGCCAG GAACGCTACA TGCTACGTTC CTACGTACCG
AACCGCCTGG CCAGTGGCGA AGTGGTGGGT ATCTTCGTGC TGATTCGCGA CATCACCGAG
CGCCGCAACA CCGCACAGGC GTTGCACCAG GCCTATCAGC ACCTGGAGCA ACGGGTGCGC
GAGCGCACTG CCGAACTGAC CAGCCTCAAC GACCAGTTGC TGCGCGAAAT CGAAGAGCGC
AGCCAGGCCG AGTCGCGTCT GCGCGAGGCC AAGCGCGAGG CCGAGCAGGC CAACCTGTCG
AAAACCAAGT TCCTTGCGGC GGTCAGCCAT GACCTGCTGC AACCGCTGAA CGCGGCGCGG
CTGTTCACCA GTGCGTTGCT CGAGCGCGAC GAACCGCAAA ACGCTGCCCA CCTGGTACGA
AATGTCAGCA ATTCGCTGGA GGATGTGGAA AACCTGTTGG GTACCCTGGT GGATATTTCC
AAGCTCGATG CCGGGGTGAT CAAGGCCGAT GTCGCCCCGT TTGCCCTCCA CGAACTGATG
GACAACCTGG CTGCCGAATA CGCCCAGGTG GCGCGTAGCG AAGGGTTAGA GCTGCATTTT
GTGGGGTGTT CTGCCGTCGT GCGCAGTGAC ATCCAGCTGC TGGCGCGCAT CCTGCGCAAC
CTGCTCAGCA ATGCTATCCG CTACACCCGC AGCGGGCGCG TGGTGCTGGG GTGTCGGCGC
CAGCGCGGTG GCGTGCGGAT TGAAGTGTGG GACAGCGGCA TCGGTATTGC CGAAGAACAC
CTGGAAGACA TGTTCCTGGA GTTCAAGCGG GGTGATGTGC AGCGCCCGGA CCAGGACCGT
GGGCTGGGCC TGGGCCTGGC AATCGTGGAG AAGATCGCCG GCATCCTCGG CCACCGGATT
CGCGTGCGGT CATGGCTGGG CAAAGGCTCG GTGTTCGCTG TCGAGGTGCC GCTGAGCGCC
ACTGCACCCA AGGCCCAGCC GAGCCAGGCG ATTTGCGAGC CGATGCTCGA ACGCCTGCGC
GGGGCGCGGG TGTGGGTGCT GGATAACGAT GCGGCGATTT GTGCGGGCAT GCGTACCTTG
CTGGAAGGTT GGGGCTGCCG GGTGGTCACC GCGCTGTCGG AGGAAGACCT GGCGCGCCAG
GTGGACAACT ACCACGCCGA GGCCGACCTG CTGATTGCCG ACTACCACCT GGACAATGAC
TGCAATGGTG TCGACGCCGT AGCGCGGATC AATGCCCGCC GCGCCCAGCC GCTACCGGCG
CTGATGATCA CGGCCAACTA CAGCAACGAT CTCAAGCAGC AGATCCGCGA GCTGGGTCAC
ACGCTGATGC ACAAGCCCGT AAGGCCGATG AAACTCAAGA CGGCGATGAG CCATCTGCTG
GCCAGTGGCG TGGCATAG
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| Protein sequence | MACTSTRPSP GSPLPATGLL SVAELQAELT RLQHQNHKLQ RINDALIERI ESGVTRGNDP
YAAFQHSVVL AEQVRERTDA LNQAMAELKA VNRLLSEARQ RAETAHQHQI RLITDNVPAL
IAYLNADLVY EFTNKVYEEW YCWPHGVMLG QSLREAHSEQ HYQRLEGYVA RALAGESVTF
EFAETNINGQ ERYMLRSYVP NRLASGEVVG IFVLIRDITE RRNTAQALHQ AYQHLEQRVR
ERTAELTSLN DQLLREIEER SQAESRLREA KREAEQANLS KTKFLAAVSH DLLQPLNAAR
LFTSALLERD EPQNAAHLVR NVSNSLEDVE NLLGTLVDIS KLDAGVIKAD VAPFALHELM
DNLAAEYAQV ARSEGLELHF VGCSAVVRSD IQLLARILRN LLSNAIRYTR SGRVVLGCRR
QRGGVRIEVW DSGIGIAEEH LEDMFLEFKR GDVQRPDQDR GLGLGLAIVE KIAGILGHRI
RVRSWLGKGS VFAVEVPLSA TAPKAQPSQA ICEPMLERLR GARVWVLDND AAICAGMRTL
LEGWGCRVVT ALSEEDLARQ VDNYHAEADL LIADYHLDND CNGVDAVARI NARRAQPLPA
LMITANYSND LKQQIRELGH TLMHKPVRPM KLKTAMSHLL ASGVA
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