Gene Pput_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2170 
Symbol 
ID5190215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2462543 
End bp2463730 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID640586627 
Producthypothetical protein 
Protein accessionYP_001267493 
Protein GI148547391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA ACAATAAGCA CCTGCCGCCT CGTTTTCTCG CAGCCGCCAT CGCCAGCTTT 
TCTGCGCTTG GCCTGAGCAG CGTCGCCGAA GCCGAGATCA TGCTGTACGA CAAGGACCAG
ACGACGTTTT CCACCGATGG CTATATCAAC GCCTTCTACG TCAACAGCGA GGTCGATCGC
GAGGGCGAGC AGTTTGACCG CCGCCAGTCG CGGGTGAAGA TGGGCTTCTT GCCCAACTAC
CTCGGCTTCA ACATGGGCAA GCAGGTGGAT GACCTGAAGC TCGGCGCGCG TGCCTCGTTC
TGGGTAACCA TCAACGACAG TGAAACCAAC GGCACCGACA CCGCCATCGA CGTGCGCCAG
TTTTACGGCA CGGTGGCCAA CCCCGAGTGG GGCGAGGTGC TGATCGGCAA GGACTTCGGG
CTGTTCGCCC GTTCCAACAT CCTGCTCGAC GAACTGCTGG CCGGTTATGG CCAGGTCAGC
GACACCCTGG GGCTGGTGGA CGGCGGCGGG GTGTCGTTCG GCAACATTGG CAGCGGCTAC
CCATACCCGT TCCCTACCTC ACAGATCACC TACCGTACGC CCGTGATGGA GGGCCTGCGG
GTGGCGGTGG GCATCATGGA CCCGGTGGAC ACCAACGACA GCAGCCCGAC CGGAAAGGCC
TACCAGGAAA ACCCACGCAC CGAGAGCGAG ATCACCTACC AGTTCGACCT GGGTGGGGCG
CAGATCTACA GCTGGGTCAA CGGCAGTTAC CAGACCTCGG ACAATACTGA CTCCACGGTA
GAAACGATCA CTTCCAAGGG GGTGGGTTAC GGGGTGCAGG CAAAGATGGG CGGCTGGTCG
CTGACCGGCT CGGGGTTCCA GGCCAAAGGC ATCAACCCGT TCTTCACCAA CAATGCCGGC
GAACCGGTTT TGCGCAATGT CGACAGTGAT GGCTACCTGC TGCAGGGCTC GTACAAGTTC
GGCAAGAACC GCGTGGCGCT GTCCTATGGC AAGACCAAGG ACGATGGCAA CGGTGCGGTT
GGCAGCGGCG CGGACTACGA GACCCGGGGT GTGGCGCTGT TCCATGACAT CAACGACAAC
CTGAAACTGG TGGCCGAGTA CAACCAGTTT TCCATCGACG GGCATGACAC CAGTGCGCAG
AACGAAGACA CCGATACCTT TGCGGTGGGC GCGGTGTTGA CCTGGTAA
 
Protein sequence
MHNNNKHLPP RFLAAAIASF SALGLSSVAE AEIMLYDKDQ TTFSTDGYIN AFYVNSEVDR 
EGEQFDRRQS RVKMGFLPNY LGFNMGKQVD DLKLGARASF WVTINDSETN GTDTAIDVRQ
FYGTVANPEW GEVLIGKDFG LFARSNILLD ELLAGYGQVS DTLGLVDGGG VSFGNIGSGY
PYPFPTSQIT YRTPVMEGLR VAVGIMDPVD TNDSSPTGKA YQENPRTESE ITYQFDLGGA
QIYSWVNGSY QTSDNTDSTV ETITSKGVGY GVQAKMGGWS LTGSGFQAKG INPFFTNNAG
EPVLRNVDSD GYLLQGSYKF GKNRVALSYG KTKDDGNGAV GSGADYETRG VALFHDINDN
LKLVAEYNQF SIDGHDTSAQ NEDTDTFAVG AVLTW