| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2165 |
|---|
| Symbol | |
|---|
| ID | 5193133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2458064 |
|---|
| End bp | 2459032 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586622 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_001267488 |
|---|
| Protein GI | 148547386 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.994929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTC CTTTTGCCAT ACCGGATAAC CCCGACTCCG CGTGCCAGCC ACCGTCTGCG
AAAGACTTTC TGGTCGATCG CACCTTCCGT GCGCTTGCGC GCATTGGCGT GGTGCTGGTA
CTGGCGCTGG TCTTCGCGCT GGTCTACGAA GTCGGCCGCA AGGCACTGCC CGGCATTGAA
AAGCACGGTT TTGACGTGTT GTTCGGCAGC GTCTGGGACG TTAACCAAGG CAAGTACGGT
ATTCTGCCAG CGATCTGGGG TACGCTGTAC AGCGCCTTGA TCGCCCTGTT GATCGCCGGT
TTCTTCGGCG TCAGCATGGC CATTTTCCTG ACCCAGGATT TCCTTCCGGC CAAGCTTGCC
GCGGTGTTTC GCACCATCGT CGAGTTGCTC GCCGCCATCC CCAGCGTGGT GTACGGCCTG
TGGGGCATCT ATGTGGTCAT CCCGGCGATT CGCCCGCTGA CCGCCTGGCT GAACAGCGAG
CTGGGCTGGA TCCCGTTTTT CGGCACTTCC CTGAGTGGCC CAGGCCTGCT GCCTGCGGCG
CTGGTACTGG CGATCATGAT CCTGCCGACC ATCGCGGCGG TTTCCCAGGA TGCGCTGACC
AGCGTACCGA TGAAAACCAA GCAGGCTGCC TACGGCATGG GGACCACCCA CTGGGAAGCC
ATCCTCAAGG TGATGGTGCC CTCGGCGGCT ACCGGCATCT TCGGCTCGCT GGTGCTCGGC
CTGGGCCGTG CACTCGGTGA AACCATGGCG CTGGCCATGC TGGTCGGCAA CGCCAACACC
ATCTCCCTGT CCTTGTTCGC ACCGGCCAAC ACCCTGGCGG CGCTGTTGGC GCTGAACTTC
CCGGAAGCCG GCCCGAACGA GGTCGAAGTG CTGATGTACG CGGCACTGGT ACTGATGTTC
ATCACCCTGC TGGTGAACGT CCTCGGCTCG ATGATCATGC TCTACGCTCA GCGTGGTAAC
AAACAATGA
|
|---|
| Protein sequence | MNTPFAIPDN PDSACQPPSA KDFLVDRTFR ALARIGVVLV LALVFALVYE VGRKALPGIE
KHGFDVLFGS VWDVNQGKYG ILPAIWGTLY SALIALLIAG FFGVSMAIFL TQDFLPAKLA
AVFRTIVELL AAIPSVVYGL WGIYVVIPAI RPLTAWLNSE LGWIPFFGTS LSGPGLLPAA
LVLAIMILPT IAAVSQDALT SVPMKTKQAA YGMGTTHWEA ILKVMVPSAA TGIFGSLVLG
LGRALGETMA LAMLVGNANT ISLSLFAPAN TLAALLALNF PEAGPNEVEV LMYAALVLMF
ITLLVNVLGS MIMLYAQRGN KQ
|
|---|
| |