Gene Pput_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2159 
Symbol 
ID5193194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2453904 
End bp2454689 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID640586616 
Producthydratase/decarboxylase 
Protein accessionYP_001267482 
Protein GI148547380 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT CGCTCTTCGT ACACCAACGC ACTGCAGCCT TGCTACTGCA ACACTGGCGC 
AGCGGTGACC TGCTGACGGA ACTGCCCGCC AGCCTCAAGC CCGAGACATT GAAACAAGGC
TATGACAGCC AGGACCAGTT GTTTGCTGCT GCCGCAGGCC CGCGCGCCGG GTGGAAGCTG
GGCGTCGGCA GCCCAGCTGG CATGCGTGCA GGCAAGTTGT CGCGGCCCTT GATTGGCCAG
TTGGAAGCGG GGCGTTGCCA TGCCGATGGC GCACATATCC AGCTGCCAGC GGTTACGCCG
GTGACCATCG AATGCGAAAT TGCCTTCGTG CTGGACCGGG ATATTCCTCC GCAAGCCGGG
CGCGTACCGG TGAGTGAGGA TATTCGCGCC ACGTGCGTCA CCTTTGAAGT AGTGCGTTCG
CGCTTTGTCG ACCGCAAGGC TGTCGGCTGG CCAAGTTTTG TGGCTGACAA CGTGGGGTTT
GAAGCATTGG TGGTCGGCAA TAGCCTGGGC GCCGGTATCA ATGTGGCGTT GCTCGCCGAC
CTGGCCGAAA CCACCGAGGT GCATGTGGAT GGCCAACGAC GCGCCGGTGG CTTGTCTGGC
GATGCGGCCA CCGACCCGCT GGTGTCGCTG GCTCACCTGT ACGCGCACGC TGCCGAGCGT
GGCCAGACCC TGAAGGCCGG GGATGTGGTG ACCACCGGGG CCATGTGCCA GCCGTTCGAC
CTGCATGAAA CAGGCCACCA GGTCAGCGCC AGGTTCCTTG GCCAGACCCT GACGTTCACG
CTGTAA
 
Protein sequence
MNRSLFVHQR TAALLLQHWR SGDLLTELPA SLKPETLKQG YDSQDQLFAA AAGPRAGWKL 
GVGSPAGMRA GKLSRPLIGQ LEAGRCHADG AHIQLPAVTP VTIECEIAFV LDRDIPPQAG
RVPVSEDIRA TCVTFEVVRS RFVDRKAVGW PSFVADNVGF EALVVGNSLG AGINVALLAD
LAETTEVHVD GQRRAGGLSG DAATDPLVSL AHLYAHAAER GQTLKAGDVV TTGAMCQPFD
LHETGHQVSA RFLGQTLTFT L