| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2148 |
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| Symbol | |
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| ID | 5191022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2438500 |
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| End bp | 2439996 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586605 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001267471 |
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| Protein GI | 148547369 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGC TTCGTAAATG GCAGCCACTG CTCAAACTCG ATGGGGCACA AGCTTCGTAC
CGGCAGATCG TCGAAGGGTT GGTGGCCGCA ATCAGCGAGG GTCGCCTGCG CCCTGGCACG
CCGTTGCCGG GCACGCGGGA GATGGCGCAA CTGCTGAACG TCAATCGCAA GACCGTGATC
CTTGCTTATG AGGAAGCCGA AACCAAAGGC TGGCTGCAAA GCGTGCAACG CCGGGGCACC
TTTGTCAGCC AACAGCTGGC GCCTGGCACA GCGGCCGTTT GCGGTGCCGT GCGGCCTTTT
GCCCTGGCGC TGCCAGAGGA ACCTGCCGTT GCCTACTTCA AGGCGAACGA ACAGGCTGTA
GCCCAACAAG GCCGGCCAGG GGCCTTGTTC TTCGACAACG GCGCCTGTGA CCACCGCCTG
CTACCGCAGG CTGTACTGCA CCGCTATTAC CGCAATGCCT TGCGCAGCAG CTTCAGCAGC
AATAGCGTGC GCCACGGCAG CGAGTGCAGC AGCCGCAATC TGCGCAGCGC CCTGGCCGAC
ATGCTGCGGC ACAATCGCAG CCTGAACGTT GGCGCCGAGC ATATCTGCCT GACCCAGGGG
GTGCAGATGT CGCTGTCCCT GGTGGCCAGT GTGTTGCTCA AGCCGGGTGA CGTTGTGCTG
GTCGAGCGCC TGAGTTACCC CCCCGCCTGG GAGATCTTCC GTCAGCTGGG TGCCCGCCTG
GTGACTGTGG AGCTGGACCA TGAGGGGTGC CGGGTCGATC AGCTTGATGC CCTGTGCCGG
CAGCACAAGG TGCGGATGAT GTACATAACA CCCCATCACC AGTTCCCGAC CACGGTCAGC
CTGCCAGCCG GGCGCAGGCA ACAGCTGCTG GAGCTGGCGC GCCAGCATGC CTTTTGCGTG
GTCGAAGAAG ATTACGACTA CGAATACCAC TTTGCCGGGC GGCCTTATCT GCCGTTGGCC
AGCGACCGCC AGCAGCGGCA CGTGGTTTAC ATTGGCTCAC TGTCCAAGCC TTTGGGCAGC
ACGTTCCGTT GCAGCTATAT CGTGGCACCG GTGGAAGTGA CAACCGTGCT GGAACGCAGG
GCGATGTTGA CCCTGGGGCA GGGCGATGCA GTCATGCAGC AGATGTTGGC GGACCTGATC
AATGATGGCG AACTGAAGAA GCACTTGCGC CGCGTCAACC GCGAGTACCG GCGCCGGCGC
GAAACCTTGT TGGGGGGCTT GCGCGATGCG TTTGGCGAAC AGATCAGCGT GCAGGCGCCA
GAAGGTGGCC TGGCGCTGTG GGTGAGGTTT GCCGATGAGA TCAATGTGGA TCAGTTGGTC
GACAAAGCGC TGGAACGGGA CCTGGTGGTG CGCAGTGGGC GACAGTTTTC ACCGTTTGGC
CATGCCGAGA ATGCCTTGCG CCTGGGGTTT GCTTCGCTGG ATGCGGATGA GATTCGGCAG
GCGACCCAAC GGCTGGCAGA CGCCGCGAAA GCGATTGGCA AGGCGCGGTG GCTGTAG
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| Protein sequence | MVQLRKWQPL LKLDGAQASY RQIVEGLVAA ISEGRLRPGT PLPGTREMAQ LLNVNRKTVI
LAYEEAETKG WLQSVQRRGT FVSQQLAPGT AAVCGAVRPF ALALPEEPAV AYFKANEQAV
AQQGRPGALF FDNGACDHRL LPQAVLHRYY RNALRSSFSS NSVRHGSECS SRNLRSALAD
MLRHNRSLNV GAEHICLTQG VQMSLSLVAS VLLKPGDVVL VERLSYPPAW EIFRQLGARL
VTVELDHEGC RVDQLDALCR QHKVRMMYIT PHHQFPTTVS LPAGRRQQLL ELARQHAFCV
VEEDYDYEYH FAGRPYLPLA SDRQQRHVVY IGSLSKPLGS TFRCSYIVAP VEVTTVLERR
AMLTLGQGDA VMQQMLADLI NDGELKKHLR RVNREYRRRR ETLLGGLRDA FGEQISVQAP
EGGLALWVRF ADEINVDQLV DKALERDLVV RSGRQFSPFG HAENALRLGF ASLDADEIRQ
ATQRLADAAK AIGKARWL
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