| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2139 |
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| Symbol | |
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| ID | 5192940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2426754 |
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| End bp | 2430272 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586596 |
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| Product | cellulose synthase subunit BcsC |
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| Protein accession | YP_001267462 |
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| Protein GI | 148547360 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAA TGATCGGCGT GTTGATGCTG GCGGCAATAA CCTGCCAGGC AGATGCACAA
CCCAAGGATA TCGATGAACA GCGCCAATGG CTGCTGGACC AGGTACGCCG CGGCGAAGCG
CTGCACCGTG ACGACCTGGT GCGCGATGCG CTGGGCCGTT TGCAGTTGCT TGAGCCGCGC
AACCCGGAGG TATTGCTGGC GGCCTTGAGC CTGGCATTGC GCGAGAAGAA CAGCAGTGAA
GCCGAGCAGT TGAGTGCGCG GATCAGTGCC GTGGCGCCTG GCAGCCTGCA AGCACGTCAG
GCCGCACGCC TGCTTGAACT TCAACAACCG GCGCCTGCGC GGCGCTTGCA GCAGGCGCGT
CTGCTGGCGG TTACCGGCCG TAATGAAGAG GCGCTGGCGA TGTACGAACA GTTGTTTGCC
GGCGAACCAC CCAGCCTTGA ATTGGCCCTG GACTACTGGC GCGTGCGCGG CAACCTGCCA
GGCCAACGCC CTGAGGCGAT CCGCCAGTTG CAGCGGTTGG ATCAGCAGTA CCCGGGCAGT
GCCGGGCTGC GCCAGACACT GACCGGTTGG TTGTTCGCCG AAAAGCGTGA CCGCGAGGCC
TTGGCCCTGC TCGATCAGCT GGCGCGAGAC CCCGGTGCAC GGGATGCCGC TGCCCAGCGC
GAGTTCGACT ACCTGTCCGG GCAAGCCGTG AGTGCAACCA GCGCGGCAGC CTGGCAGGCC
TTTCTTCAGC GTTACCCAGC TTCACCGTTG TTGGCACAGG CCAGCGAGAC CTTGCAACAG
CAGCGCAAGC TGCTGGCCGA CCCGGCATGG CAGGCCGGTC AACGGGGTAA GGCATTGCTC
GACAAGGGCC GTAATGCCGA AGCTGAAACG CAGCTGCGCC GCGCCCTGCG CCAGTACCCG
GGCGATGCCA GCCTGCATGG GGCCCTGGGT TATGCGTTGA TGCGCCAGGG CCGCCATGAA
GACGCCCATG CGGCGTTCCG CGCGGCGAGC GCCAAGGAGC AGGACACCTA CTGGATCAGC
CAATGGAAGG ACCTGGAGTC GTCCAGCCAG TATTGGGCCC TGCTGAAGAA AGCCGAGCAG
GCCCTGGAGG CGAAAGACGT GCGCGGTGCG CGCGCACTTT ACCGGCAGGC TCGCCAGCAA
CGGCCAAAGG ATGAATACGC GTTGTTGGGC CTGGCAGATG TCTCGCTGGC CGAGGGCGAT
GTGGCGGCTG CCGAGCGGCA GTACCTGCAG GTACGGCGTA TGGCGCCGGA TAACGAAAGT
GCCGTGCGCG GCTTGATGCG CGTTTACCAG GCGCAGTCGC CAGGCAAGGC GCAGGCATAC
CTGGACAGCC TGCCACCACG GCAGCAGGCG CAGTTCGCCA GCCTGCGACG CAGCCTGGAA
CTTGCGCGCC TGCGCCAGCA AGGGGACGAA GCCCTGCAGC GCGAGGACTG GTCGACGGCC
AGCCATGTGC TGGGCCAGGC TTCAGCCCTG GCTCCCGATG AGCCTTGGCT GGTGTATCAG
CTGGCCAACA GTCTGCGTCA CCAAGGGCGC ACTGGCGAGG CCGACGCGGC ATTTGCCAGG
CTGGTGCAGC ACCAGCCACG TGATCCGGCA ACGCGCTATG CCCACGGCCT GTTCCTGGAG
TCCAGCGACC GTGATGCCTT GGCTCTGGAC AGTCTGAGAG CGGTACCTCA GGCGACCTGG
AGCGCGGACA TGCACGCGCT GGAGCAACGT GTTCAACGGC GTATGACCCT GGCCTCTGCG
CAGCAGTTGC AGGCACAAGG CCGCGGTGCC GAGGCGACAG CCTTGCTTGA AGCCGGCCTG
GCGCGTGGTG AAGGCAGCTC GGACGACTTG ATGCTGTTGG CTGACTGGGC AGCCGCGCGT
GGTGAACATG GCAAGGCGCG CAGCTATTAC CAGCGTGTGC TGGTCGCGCA GCCTGGGCGT
CCTGATGCAC GCCTTGGGGT GATGGAAAGC GCCGTGGCCG AAGGCAACCT GCAGCAGGCC
CGGCACATGC TGGGCGTGAA GGTGCCACAA TTTGCCGCTG ATGACGGCAA CGCCCAGCGG
CGCCTGGCGG CGCTGTGGAC CGCGTTGGGC GAACACGATC AGGCGGCCAG GCTGCTTGAC
CGGATTGCCG CGCAGCAGAC GCGACCCGAT CCGTTGTTGC GACGCGACGC AGCCCGCCTG
GTAGCGCAGG ATGATCCTCA ACGAGCATTG GACCTTTACG CGGCAGCGAT GGCTGATGCG
CAGTTGCTGG ACCGTGCTGC CGTAGCGCCA CGGGATGACC GTGCATTGAC CCTGGCCAGC
CGCGAGCGGG ATGGCGACGA CTGGCTGGCC CGCAGCCTGC GCAGTGATGT GGACGCCCTG
TATCGCCAGC GCAATACCCA TGTGACGCTG ATGCATGACT ACGGCTGGCG CGAGGATGAC
GGTACGCCCG GCACGTCGGA GCTGAGTACC CAGTCGACCT TGTTGCATGT CGACACTCCT
TGGCAGGAGG GCACCGCGTT TGCGCGAGTA GAGCGCATTG GCATGGATGC GGGGTCGTTC
GAGCCGAACG ATCAGGGAAG CTACACCCCC GACTTCGGCA GCTGCCAGTT TGTTGGCCAG
ACCGCTGACG GCAAAACACT GCCCGCGTGC ACGGGGGGAT CGCAGACTGC AAACGGCAGC
CTGTTGGCGT TGGGTTGGCA GGGCAGCCGC TGGGCGTTCG ACCTGGGCAC CACCCAGGGC
TATGCAATCA ACAACTGGCT GGGCGGCGCA ACGGTCAACG GTGACCTCGG GCAGGTTGAC
TGGTCGCTGA CCGCCTCGCG CCGGCCGATG AGCAATTCAT TGCTGTCGTT CGCCGGCGCA
CGCGACCGCC CGACGGGCGT GCGCTGGGGC GGGGTCACTG CCAATGGCGC CACGCTCGGA
CTGAGCTGGG ACCAAGGTGG CGACAACGGA GTGTGGGCCA GCCTGGGGCA CCATTGGCTG
TACGGCGAAA ACGTGGCCGA CAACCAGCGG ACCCGGGCCA TGGCCGGCTT TTACCACCGC
GTGGTGGAAA AGGCCGACGA GCGTGTCCGT GTTGGCGTGA CGCTGATGCA CTGGCGCCAT
GACAAGGACC TGGGCGGCTA CAGCCTGGGG CAGGGCGGTT ACTACAGCCC GCAGCGCTAC
AGTTCGGTGG GCGTGCCGGT CAGTTATGCC TGGCGCAACT ACGACTGGTC GCTGCTGCTG
GAAGGTTCCG TCAGTTGGTC TCAGGCTCAT AGTGGCAGTA GCCGCTTGTA CCCGGACGCA
CACATCAACC GCAAGGTACT GGCAAATTAT GGCGTCGATT CCAACATCGA TGCGATGACC
GAAGCCAGCG ACAGCAGCGG GTTGGGCTAC CGCCTGCGCG GTCTGTTCGA ACGGCGCCTG
AGTGACCAGT GGGTACTGGG CGGCGGCTTC GACTGGCAGC ACAGCGATGA CTATGCGCCT
AGCCATGGCA TGCTCTACCT GCGCTACCTG TTCGAACCGT GGCGAGGCAA CCTGGCCCTG
CCGGTGACAC CGCTGGAGCC TTACAGCGAG TGGCGGTGA
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| Protein sequence | MQRMIGVLML AAITCQADAQ PKDIDEQRQW LLDQVRRGEA LHRDDLVRDA LGRLQLLEPR
NPEVLLAALS LALREKNSSE AEQLSARISA VAPGSLQARQ AARLLELQQP APARRLQQAR
LLAVTGRNEE ALAMYEQLFA GEPPSLELAL DYWRVRGNLP GQRPEAIRQL QRLDQQYPGS
AGLRQTLTGW LFAEKRDREA LALLDQLARD PGARDAAAQR EFDYLSGQAV SATSAAAWQA
FLQRYPASPL LAQASETLQQ QRKLLADPAW QAGQRGKALL DKGRNAEAET QLRRALRQYP
GDASLHGALG YALMRQGRHE DAHAAFRAAS AKEQDTYWIS QWKDLESSSQ YWALLKKAEQ
ALEAKDVRGA RALYRQARQQ RPKDEYALLG LADVSLAEGD VAAAERQYLQ VRRMAPDNES
AVRGLMRVYQ AQSPGKAQAY LDSLPPRQQA QFASLRRSLE LARLRQQGDE ALQREDWSTA
SHVLGQASAL APDEPWLVYQ LANSLRHQGR TGEADAAFAR LVQHQPRDPA TRYAHGLFLE
SSDRDALALD SLRAVPQATW SADMHALEQR VQRRMTLASA QQLQAQGRGA EATALLEAGL
ARGEGSSDDL MLLADWAAAR GEHGKARSYY QRVLVAQPGR PDARLGVMES AVAEGNLQQA
RHMLGVKVPQ FAADDGNAQR RLAALWTALG EHDQAARLLD RIAAQQTRPD PLLRRDAARL
VAQDDPQRAL DLYAAAMADA QLLDRAAVAP RDDRALTLAS RERDGDDWLA RSLRSDVDAL
YRQRNTHVTL MHDYGWREDD GTPGTSELST QSTLLHVDTP WQEGTAFARV ERIGMDAGSF
EPNDQGSYTP DFGSCQFVGQ TADGKTLPAC TGGSQTANGS LLALGWQGSR WAFDLGTTQG
YAINNWLGGA TVNGDLGQVD WSLTASRRPM SNSLLSFAGA RDRPTGVRWG GVTANGATLG
LSWDQGGDNG VWASLGHHWL YGENVADNQR TRAMAGFYHR VVEKADERVR VGVTLMHWRH
DKDLGGYSLG QGGYYSPQRY SSVGVPVSYA WRNYDWSLLL EGSVSWSQAH SGSSRLYPDA
HINRKVLANY GVDSNIDAMT EASDSSGLGY RLRGLFERRL SDQWVLGGGF DWQHSDDYAP
SHGMLYLRYL FEPWRGNLAL PVTPLEPYSE WR
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