Gene Pput_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2136 
SymbolbcsA 
ID5193017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2420757 
End bp2423366 
Gene Length2610 bp 
Protein Length869 aa 
Translation table11 
GC content65% 
IMG OID640586593 
Productcellulose synthase catalytic subunit 
Protein accessionYP_001267459 
Protein GI148547357 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID[TIGR03030] cellulose synthase catalytic subunit (UDP-forming) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGA CCCCTTTGTC GGCCTATACC TGGTTCACCG TCCGTGGCGC GCGTCTGCCG 
GTCGCATGGC TGTTCACCCT CGGCGTGTGG CTGGCCTTCC TGTTTCTGCG CCTGGAGTCA
CCCGCCTGGC AGGCGCTGCT GGCCGAGCGC CAACGCCTGT ACCCGCAACT GGCGGGCAAG
CGCCCAACCC TGGGTGACCC GCTGCGTCTG TTGATCCAGA GCCTGTGGTT GTTGCTGCGG
CGCCAACCGC AGGCACGTAC AACAGGGCCT GGCCGCCGCG CGTTGGGCGC GGTGCGCATG
CACCTGCGGG CGGCAGGCGG GGTGGCGCGC CACTACCGCG GCCTGCTGAT CGATGCATTG
CAACAGGTGC CCGCGCGCTA CCGCGCCAGT GCTTTCAGGC ACCAGGCCTC GGCACGCCTG
CGCGGCCTGA GCGTGTTTGC CCGGCGGGCG TTCTACAGCG TACTGACGGT GTTCGCCCTC
AGCCTCGCCC TGCTGTGCGT GACGGAACCG TTCGGCTATC TGGCGCAACT GATGTTCATC
TGCCTGCTGC TGGTCATCGC CCTGCTGGTG CGACACATGC CGGGGCGTTT CCCGACCCTG
ATGCTGATCG TGCTGTCGAC CATCATCTCG TGCCGCTATC TGTGGTGGCG CTACACCTCG
ACCCTGAACT GGAACGACAC CACCGACTTG GTATTCGGGG TGATCCTGTT GGCGGCGGAA
ACCTATTCGT GGTTCGTGCT GATCCTGGGT TACATCCAGA CCAGCTGGCC ATTGCAGCGC
AAGCCGGCAA ACCTCCCGGC CAACGCCAGG CACTGGCCAA CCGTCGATTT GCTGATCCCC
ACCTACAACG AAGACCTGTC AGTGGTGCGC ACCACGGTAA TGGCCGCGCT GGGCCTGGAC
TGGCCACGCG AGTGCCTGCG CATCTATATC CTCGATGATG GCCGCCGCGA CGCGTTTCGT
GCCTTTGCCG ACGAAGTCGG GGTAGGGTAT ATCGTGCGGC CCGACAGCAA GCATGCCAAG
GCCGGCAACC TCAACCATGC GCTGGGCGTC ACCGACAGCG AGTTGATCGC CATCTTCGAT
TGCGACCATG TGCCGGTGCG CTCCTTCCTG CAACTGACCG TGGGCTGGTT CCTCAAGGAC
GCTAAACTGG CGCTGGTGCA GACACCGCAC CATTTCTTCT CGCCTGACCC GTTCGAGCGC
AATCTCGGCT CGTTCCGCCG CCGCCCCAAC GAAGGGGAGC TGTTCTACGG TCTGATCCAG
GACGGCAACG ATATGTGGAA CGCGGCGTTT TTCTGCGGCT CGTGTGCTGT GCTGCGCCGC
ACTGCGCTGG AAAGCATCGG TGGTTTTGCC GTCGAGACCG TGACCGAAGA TGCCCACACC
GCCCTGCGCC TGCATCGCCA AGGGTGGACG TCAGCCTACC TGAGCATTCC GCAGGCTGCG
TGCCTGGCCA CTGAAAGCCT GTCGGCGCAC ATCGGCCAGC GCATTCGCTG GGCCCGTGGG
ATGGTGCAGA TCTTCCGCAC CGACAACCCG CTATTCGGGC GTGGCCTTAG CCTGTTCCAG
CGGGTGTGCT ACGCCAACGC GATGCTGCAC TTCCTGGCCG GCCTGCCGCG GCTGGTGTTC
CTGACGGCGC CACTGGCGTT CCTGTTGCTG CATGCCTACA TCATCTACGC ACCGGCATTG
ATGATTCTGC TGTACGTGCT GCCACACATG ATCCACGCCA GCCTGACCAA CTCGCGCATG
CAGGGCAAGT ACCGACAAAC CTTCTGGGGC GAGGTCTACG AGACCGTACT GGCCTGGTAC
ATCGCCCGCC CGACCACGGT GGCGCTGTTC GCGCCGAAAA AAGGCACGTT CAACGTCACC
GCCAAGGGCG GCCTGATGGA GCAGGAACAG TTCGACTGGC GCATCGCCCA ACCTTACCTG
TGGCTGGCGG CGCTCAACGT GGTGGGTCTG GGCTTTGCGG GGTGGCGCCT GGTCACCGGC
CCGACGGCAG AAATCGGCAC GGTGATCGTC AGCTCGCTGT GGGTGATCTA CAACCTGCTG
ATCATCGGTG CCGCAGTTGC GGTGGCCGCC GAAGTGCGCC AGGTGCGCCG CGCCCATCGG
GTGCAGATGC GCTTGCCGGC GGGGCTGATG CTGGCCAGCG GTCATGCCTA CCCCTGCACC
CTGGTCGACT ACTCCGACGG CGGTATCGGC CTGCAGGTAC AGCCCGGTCT GGAGCTGAAA
CCGGGGGAGC AGGTACGCCT GCTGCTCAAC CGCGGCCAGC GCGAGTTCGC CTTCCAGGCG
TGCGTCACCC GTACCGTCGG GCAACACGTG GGCCTGGTGT TCCGCGACCT CGCCCTGCAG
CAGCGTATCG ACCTGGTCCA CTGCACCTTT GCCCGCGCCG ATGCCTGGCT TGGCTGGAAC
GAGCAGCACG AGGTCGAGCG CCCGCTGCGC AGCCTGATCG ATGTGTTGAA GCTGGGCGGC
GTCGGTTACG TGCGCCTGGT CGAGCACATG CCGCCATGGC TGCGGGCGTG GTTGCGCCCG
TTGCGTTCGC TGGCGCTGTG GCTGGCCAGC TACTGGCCCC GCACACCGCG GGCAATCCCT
TCCATGAACC CTGTTGATCG AGACGCATGA
 
Protein sequence
MTLTPLSAYT WFTVRGARLP VAWLFTLGVW LAFLFLRLES PAWQALLAER QRLYPQLAGK 
RPTLGDPLRL LIQSLWLLLR RQPQARTTGP GRRALGAVRM HLRAAGGVAR HYRGLLIDAL
QQVPARYRAS AFRHQASARL RGLSVFARRA FYSVLTVFAL SLALLCVTEP FGYLAQLMFI
CLLLVIALLV RHMPGRFPTL MLIVLSTIIS CRYLWWRYTS TLNWNDTTDL VFGVILLAAE
TYSWFVLILG YIQTSWPLQR KPANLPANAR HWPTVDLLIP TYNEDLSVVR TTVMAALGLD
WPRECLRIYI LDDGRRDAFR AFADEVGVGY IVRPDSKHAK AGNLNHALGV TDSELIAIFD
CDHVPVRSFL QLTVGWFLKD AKLALVQTPH HFFSPDPFER NLGSFRRRPN EGELFYGLIQ
DGNDMWNAAF FCGSCAVLRR TALESIGGFA VETVTEDAHT ALRLHRQGWT SAYLSIPQAA
CLATESLSAH IGQRIRWARG MVQIFRTDNP LFGRGLSLFQ RVCYANAMLH FLAGLPRLVF
LTAPLAFLLL HAYIIYAPAL MILLYVLPHM IHASLTNSRM QGKYRQTFWG EVYETVLAWY
IARPTTVALF APKKGTFNVT AKGGLMEQEQ FDWRIAQPYL WLAALNVVGL GFAGWRLVTG
PTAEIGTVIV SSLWVIYNLL IIGAAVAVAA EVRQVRRAHR VQMRLPAGLM LASGHAYPCT
LVDYSDGGIG LQVQPGLELK PGEQVRLLLN RGQREFAFQA CVTRTVGQHV GLVFRDLALQ
QRIDLVHCTF ARADAWLGWN EQHEVERPLR SLIDVLKLGG VGYVRLVEHM PPWLRAWLRP
LRSLALWLAS YWPRTPRAIP SMNPVDRDA