Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2132 |
Symbol | |
ID | 5192020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2416563 |
End bp | 2418053 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586589 |
Product | hypothetical protein |
Protein accession | YP_001267455 |
Protein GI | 148547353 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03369] cellulose biosynthesis protein BcsE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0914278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTTGT TGGCGATTTC CGGCCTGAGC GTCGAGAGCA GCCAGCTTCA TCAACAAGGA CTGTACTGGT TAGCCTGTGA CGCCGCCGAA GACGCCTCCT TGCTATGCCG CCAGGTGGTC GAAGGCATGC CCGATAATGC CAGGGCAGCA CTGATCGCCG ATGCGCAAGC CATGGATGAC GTGCTGGGTG CGCTCGGCGC AACGCGCGGC CCGGCCGAGC TCGCGTTGTA TGAGGCCAAC TCGCAAGCCA CCCGTTATCT GGTTGAAGAC CTGCCTCGTC TTGATGCCCG TGGGCGTGTG CTGGTGCTGC TGGCACCGGC ACACGCCTGG GCGGATACCG AAGTCGAGCA CTGGTGCAAT GCGCTGCGCC CGGCGTTGTT GGCTGAAGCG GCGTTGCTGC TGGTCGTCAG TGGGGGGCAG AGCACCGCCT TGGTCGAGCG CCTGCGCGTT TTCAACCAGT GCCTCGACGG CCTGGGGCAG GTGTACCGTG GCAAAGGTGG GGTGCGCTAC CTGCAGCATT TCTGGAGCAA CCCGCTTGGC AAAACCGCCA CTCGGGACAT GGAGCTGACT CGGCTGAGCG CGGGCTTTGC CGTTGCTGCC ACGCATGAGG CACCCAGCGA CACCGGTGGT GACGAGTTGC TGTGCCTGGC CCAGCGCCCG GTACTGGAAG GCGCGCCAGC CTTCTCCGAA CACTGGCAGG TCTGCGAAAG CTTTGAGGAA CTGGGGGGCA AAGCCAGCCG TGCGGTGTCT GCCACGGTGA TCTTTGCCAT GGACGGTGGG CAGCGTCTGG ATAGCCTGGC GCGCCAGTTG CACCACCTGC GGCAGTCGCG TGGCAACGCC TTGAAGCTGG TGGTGCGCGA AATGGCGCCG ACCCTGCGTT ACCAAGACGA ACAGTTGCTG CTGGCTTGTG GTGCCAGCCA GATCGTGCCG TTCGGTGCCA GCTTGTCACG CTTCCTGACC ATGGTGGAGA GCATCCAGGG TTACGTCTGG CGTCGACACC TGCCAACCGA CTTCGATGCC TTGCTGGCAC GCCTGCGGCC GCTGGCCATC TGCGGGTTGG TAGCGCCACG GGCGTTCGCC GAGGCTGTGC AAAGCATGTG GCACGGGGTG CGCAACGGCG AAATCGTCCA CCAGTTGCTG GTGTTGCGTC CGGCGCCCGG CCTGACCCCG CTGCAGGCTT GCTCGCGTAC GGTATTCCGC CGTGATGGCG ACATTGCCTG CGTGGTTGGC GAGGTGCTGT TCCTGTTCCT GTTCGCTTGC CGCTCGGAAG GGGTCGAGCA GGCGCTTGAC CACATCTTCC AGCTGTCATG GAAAGAGCTG TTCATCAGCC AGGAGGTGCT TGCCGGTGTC GACAGCCTGA CCACTCCGGC CTTCCTCGAC AGCAACCTAC CGCAGCCACC CCGCAGCGAC ACGGCGGCGC AACTGCCTGC ACAGGCATGG TCGGCGCTGG CACCGCGCAA GGTTGGCCTG GCCAAGCGGG GTGGCGCATG A
|
Protein sequence | MQLLAISGLS VESSQLHQQG LYWLACDAAE DASLLCRQVV EGMPDNARAA LIADAQAMDD VLGALGATRG PAELALYEAN SQATRYLVED LPRLDARGRV LVLLAPAHAW ADTEVEHWCN ALRPALLAEA ALLLVVSGGQ STALVERLRV FNQCLDGLGQ VYRGKGGVRY LQHFWSNPLG KTATRDMELT RLSAGFAVAA THEAPSDTGG DELLCLAQRP VLEGAPAFSE HWQVCESFEE LGGKASRAVS ATVIFAMDGG QRLDSLARQL HHLRQSRGNA LKLVVREMAP TLRYQDEQLL LACGASQIVP FGASLSRFLT MVESIQGYVW RRHLPTDFDA LLARLRPLAI CGLVAPRAFA EAVQSMWHGV RNGEIVHQLL VLRPAPGLTP LQACSRTVFR RDGDIACVVG EVLFLFLFAC RSEGVEQALD HIFQLSWKEL FISQEVLAGV DSLTTPAFLD SNLPQPPRSD TAAQLPAQAW SALAPRKVGL AKRGGA
|
| |