| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2129 |
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| Symbol | |
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| ID | 5190402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2409249 |
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| End bp | 2410712 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586586 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001267452 |
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| Protein GI | 148547350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGG TAGCGCAGGT ATCCGGGGAA GAGGTCACTC GGTTGCTCGC GCCGATTGAT
CCGGCAGTTC CGGCTGGCCT GTTCGATGTC GAGGACGAAA CCTATCAGGC CATTGATCAG
GAGATGGTCA AGCTGGGTGG GCTGCAGGAA GCCTCGATCG ACTGGGTCTA CATCGAAGAC
GCGTCCCGTC AGTACCTGAG CCAGCAATGC AAGCACTTGC GAATTGTTGC GCACCTGAGT
ACCGCATGGT TGCGTAGCGG CTGCTGGGAG CAGTGGGGAT GCACCTTGGC GTTGCTGGCC
GGCATGCTCG AGTGCTATTG GGAAGCCGCT CATCCCAAGC CGGGACCGAA AGGCTTCCTG
GGCAAGCGCA AGCTGGTTGC CCTGGTGATC GATCGCTTGG CCGAGGCGCT CCCTCGTCTT
GATCGTTTTA CCTACACCCC GACCCACGCA GCGGCAGCGC AGGCTGCCTT GAAACGCCTG
CAGCAACAGG AAACAGTGCA GCTGGACACG GCAGCACTGG GCGAACTTGA GCGCCTGCTA
GGCAAGTACT CGGAACTTGC CAACGGTGTT GGCGAGGCTG CTGTGCCCAA AGCGCCGGCT
GCAACCGAGA AGCCTGCGCC GTTGGCCGAT GTCATCGCCA CACCCGTGTC ACGCATGTCG
ATGGGCAATG AGCGTGAGAC ACGGCGGGCC GTGCTGTCCA TGGCCGAGCT CATCAACCAG
CAGGACCCTT ACGACGCTAC CGGCTATCAG TTACGGCGTT TCGGTTTGTG GGCGCACATT
CAGGTTGCTC CCCAAGTCAG GCAGGGCAAC CGTACGGAAT TGATGGCGGT GCCGCTGGAT
ATCACGCGGG TCTATGACGA GGCCATTGCC AGTAAGGCGG TTGACCCCGC CTTGCTGCAG
CGTATTGAAA AGAGCCTGAC GGCTTGCCCC TTCTGGATTC GTGGCAGCTT TCTGGCTGCG
ACCGTCGCCA CACAGCTGGC GATGTGCGAG GTGGCCGAAG CCATCCGCTG TGCCACCGCC
CGGTTTGTAC AGCGCATGCC GTCGCTGCAG CAGTTGTGCT TCAGCGATGG GCTGGTATTT
GTCGACGATC AGTGCCTGGC CTGGCTTAAG GGCACGCAAG GGCCGTCTGG CCAAGGTGCA
ACCCCCCAGG AGTTCAGCGG CCTGCGCGAG GAGTTGGTCA GCCAGCTGGA AACCGGTGGC
GTAGAACCGC TGCTCCTTCG GCTGCAAGGG CTGCAAGCGG GCTTTCGTGC TCCCCGTGAG
CGCTGCCACA CCACCGTGAT TGCAGCTGAT CTGCTGGCCG CGCGGGGTGT GTCCTGGCTG
GCCCAGGACC TGTGCGCCAA CGTTGCCCGA ACCATGCAGC AAACCACCGC CAGTGCGTGG
GAGCCCGAGG TGTTTCAGCG GCTTCAGCAG TACGCGGCAT CCCCAGTGTT GGCAGTTCAA
GACAAGGATC AGGAGCCTCG ATGA
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| Protein sequence | MSVVAQVSGE EVTRLLAPID PAVPAGLFDV EDETYQAIDQ EMVKLGGLQE ASIDWVYIED
ASRQYLSQQC KHLRIVAHLS TAWLRSGCWE QWGCTLALLA GMLECYWEAA HPKPGPKGFL
GKRKLVALVI DRLAEALPRL DRFTYTPTHA AAAQAALKRL QQQETVQLDT AALGELERLL
GKYSELANGV GEAAVPKAPA ATEKPAPLAD VIATPVSRMS MGNERETRRA VLSMAELINQ
QDPYDATGYQ LRRFGLWAHI QVAPQVRQGN RTELMAVPLD ITRVYDEAIA SKAVDPALLQ
RIEKSLTACP FWIRGSFLAA TVATQLAMCE VAEAIRCATA RFVQRMPSLQ QLCFSDGLVF
VDDQCLAWLK GTQGPSGQGA TPQEFSGLRE ELVSQLETGG VEPLLLRLQG LQAGFRAPRE
RCHTTVIAAD LLAARGVSWL AQDLCANVAR TMQQTTASAW EPEVFQRLQQ YAASPVLAVQ
DKDQEPR
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