Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2127 |
Symbol | |
ID | 5194064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2407780 |
End bp | 2408283 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640586584 |
Product | hypothetical protein |
Protein accession | YP_001267450 |
Protein GI | 148547348 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA ATACGGGATC CGTTGCGCCG AAAGAACGCG TCAATATCAA GTATGTGCCC GCTACCAGCG ATGAGCAGGC CGAGGTGGAG CTACCGCACA AGATGCTGGT GCTGGGCGAC TTCGGCCTGG ATGACAGCCG TGCGCTTGAG GACCGTCAGG TCATGCGCAT CGATAAACAT ACATTCAACA GCGTGTTGAA CGACGCCAAC GTAAGCCTGG ACGTAACGGT ACCGTCCAGG CTTCGCACCG CCCCGGATAC CGAGCTGGCC GTCCACCTGC AGTTCAGGTC CATCAACGAT TTCGGGCCGG ACCGGATCGC GCGCCAGGTG CCCGAGCTGA ACAAGCTGCT GGCGCTGCGC GAAGCACTGG TCGCCCTGAA AGGCCCGCTG GGCAACGTCC CGGCCTTCCG CAAGCAATTG CAGCACCTGC TTAACAACGA GCAGGCGCGT AAGCAGCTCG CCCAAGAACT GGACCTGGTG CTCGAGGCGC CAGAAAAAGA TTGA
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Protein sequence | MSKNTGSVAP KERVNIKYVP ATSDEQAEVE LPHKMLVLGD FGLDDSRALE DRQVMRIDKH TFNSVLNDAN VSLDVTVPSR LRTAPDTELA VHLQFRSIND FGPDRIARQV PELNKLLALR EALVALKGPL GNVPAFRKQL QHLLNNEQAR KQLAQELDLV LEAPEKD
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