| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2120 |
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| Symbol | |
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| ID | 5192084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2400362 |
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| End bp | 2401699 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586577 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267443 |
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| Protein GI | 148547341 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAC GCAATCCCGT TCTCTGGCCC GAAGGCCTGT TCGTCAAACC ACAGCATTTC
CAGCAGGCGA CCAGGGCCAG CGAAGCAGCC CTGCACCAGC GCCTCGCCAG CCTCAACGCA
GCCTTCTACG GCTTCAGCGA ACTTCAGTTG AGCGACGAAT ACCTGAGCCT GGGCAAAGTC
GCCATCACCC GGGCGCGCGG TGTGATGCCG GACGGCACGG TGTTCGACAT TCCCGCCGAC
CTGCCGCCAC CGCCGCCGCT GGAAATCGGC GACGACGCGT GCCAAGACAG TGAGGTGTAT
CTGTGCCTGC CGCTGCGTAC CGATGGCGGC CGCGAAGTGA GTTGGCCCGA CAATGCAGCC
AATTTCCGCT ATACCGCCCA GGCACAGGAA ATCAAGGATA CCCACACCGC TGACGGCGAC
CTGGTGCAGG TAGACCTTGC GGTGCCCAAC CTGCAGCTCA AACGCAAGAC CGAAGACAGC
AGCGCCTACA CCCGCCTGGC CCTGGCACGT ATTCTGGAAC GGCGCCCCGA CGGCAGCCTG
CAACTGGACG AAGCGTTCTA CCCCACCAGC GTTTCGGTGC GGGCGGTGCC AGCGCTGCAG
CGGTTTCTTG AAGAAATCAC CCATACCTTG CGCGAGCGGG CGCGCGGCCT CGCCACGCGG
ATTGGTGCCT CGGGCCAGTC CGGGATCGCC GACATTCGCG ACTTCAACCT GCTGCAGGCC
ATGAACCGTT GGTGGCCATG CTTCCAGCAT CTGGCCAGGC AAGCGCAAAC GCACCCCGAG
CAGCTGTACC TGTGCATGAG CCAGGCCTGC GGCGAATTCG TCACCTTCAC CGACCAGAAC
AGGCTGCCGC AGGAGTACCC CGCCTATCAC CACACCGCGC TGCGCACCTC TTTCAAACCA
CTGGAAGACA CCTTGCGTCG GTCTCTGAGC ACCGTCTTGC GGCCACGCGC TGTTTCACTA
CCGCTGGAGA GCGAACAATT CGGCGTGATG ACGACCACGC TGGAAGACCG CCGGCTGATC
GACGAAGCCG ACTTCATCCT CGCCGTGCGC GCCAGCATGC CACCACAGGC GTTGCGCCAG
ATGTTCATCC AGAAAGCCAA GATCACCTCG CTTGAGTCAC TGAATGACCT GGTGCCGCTG
CAATTGCCGG GCATCCCTTT GTTGCCATTA CCCGTGGCGC CCCGCGACCT GCCCTTCCAT
GCGGGCTTCA GCTACTTCGA GCTGGACCGA CGAGACCCGG CCTGGGCGTG CATGAGCAAG
GCGAATGGCT TCGGCATCCA CATTGCGGGC GACTTCCCAG GGCTTGAACT GCAGTTCTGG
GCGATCAGGA GTGAGTGA
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| Protein sequence | MSSRNPVLWP EGLFVKPQHF QQATRASEAA LHQRLASLNA AFYGFSELQL SDEYLSLGKV
AITRARGVMP DGTVFDIPAD LPPPPPLEIG DDACQDSEVY LCLPLRTDGG REVSWPDNAA
NFRYTAQAQE IKDTHTADGD LVQVDLAVPN LQLKRKTEDS SAYTRLALAR ILERRPDGSL
QLDEAFYPTS VSVRAVPALQ RFLEEITHTL RERARGLATR IGASGQSGIA DIRDFNLLQA
MNRWWPCFQH LARQAQTHPE QLYLCMSQAC GEFVTFTDQN RLPQEYPAYH HTALRTSFKP
LEDTLRRSLS TVLRPRAVSL PLESEQFGVM TTTLEDRRLI DEADFILAVR ASMPPQALRQ
MFIQKAKITS LESLNDLVPL QLPGIPLLPL PVAPRDLPFH AGFSYFELDR RDPAWACMSK
ANGFGIHIAG DFPGLELQFW AIRSE
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