Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2116 |
Symbol | |
ID | 5192609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2395681 |
End bp | 2396604 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640586573 |
Product | hypothetical protein |
Protein accession | YP_001267439 |
Protein GI | 148547337 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAA CGCCATCACC TGCTCCGCGC AGCGAAGACT TTGCTCACAA CTGCCGCTTT CTGCTGCTCA TGACCAGGGC AATCGAGTAC TGGGCCTATC GGCCCATCCC GCAGGAAGGT GAACTGGTTC CTGCTTATGC CCCATCGGTA CTCGAGCTTA TCAACGCTGT CAGCCGGAAT ACTCAAAAGG CATGGTTATG GAAGAACAGC GCCTTGGATG ACCGTCATGA GTTTGGGCCT TTGCTGGTGG ACGTTGCAGA CGCTCACGAG CTGCTTGCCC ATGCAATCAC GACCTGGATG CCTATCGGTG GAGCTATCGC GCTGGATGCC GAGGTTGGCC TGGCAGCGCT GGCAGACCAC TTCACCAGCC TGGTGCAGGT CGTACTCCCT GATCAGAGCG TTGCCACTCA CCATGTCACA CCGGACCATC TTGCAGCCTG GCTGAATGCG CTGGACGACA ACCATCGCAA GGTCTGGCTT GGCCCAGTGT CTCGGTTGGC ATGGCGAGTC AACTGGGGGC CGGCTCATGA GTGGAAAACA CACGAAAACA AGCCGATTGC TGCCCGCTCA AGATCAGAAC TGCCTTTGAC CCTCCACCCG CTTGAACTTG ATCAGCTGCA AGCAGGCATG CACGAGCACT TCGTCCTCTC ATTGGCGCAT GAGGTCTTGG CCATGCCGCC CCATGCCAAC CATACCTTGG CGGACATACG CCTATGGATA GAAACACTCC TGCCGCAACT GACAGCCCTC AATTTCCGGA GCGAGGAAGT TGCGGGCCAA TTCATTCGGC TGATAGCCGG GCACATGTGG CTGATGAGCA ATGACAAGGC GGGAAAAATC TACACCAACC TCGAAGAGTC GCCCCAGGCC CGCCTTCGCG AACTCCAGGC ACTGGTCGAA AGCAAGGCGC CTGCCCATGA CTAA
|
Protein sequence | MTTTPSPAPR SEDFAHNCRF LLLMTRAIEY WAYRPIPQEG ELVPAYAPSV LELINAVSRN TQKAWLWKNS ALDDRHEFGP LLVDVADAHE LLAHAITTWM PIGGAIALDA EVGLAALADH FTSLVQVVLP DQSVATHHVT PDHLAAWLNA LDDNHRKVWL GPVSRLAWRV NWGPAHEWKT HENKPIAARS RSELPLTLHP LELDQLQAGM HEHFVLSLAH EVLAMPPHAN HTLADIRLWI ETLLPQLTAL NFRSEEVAGQ FIRLIAGHMW LMSNDKAGKI YTNLEESPQA RLRELQALVE SKAPAHD
|
| |