Gene Pput_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2116 
Symbol 
ID5192609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2395681 
End bp2396604 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID640586573 
Producthypothetical protein 
Protein accessionYP_001267439 
Protein GI148547337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA CGCCATCACC TGCTCCGCGC AGCGAAGACT TTGCTCACAA CTGCCGCTTT 
CTGCTGCTCA TGACCAGGGC AATCGAGTAC TGGGCCTATC GGCCCATCCC GCAGGAAGGT
GAACTGGTTC CTGCTTATGC CCCATCGGTA CTCGAGCTTA TCAACGCTGT CAGCCGGAAT
ACTCAAAAGG CATGGTTATG GAAGAACAGC GCCTTGGATG ACCGTCATGA GTTTGGGCCT
TTGCTGGTGG ACGTTGCAGA CGCTCACGAG CTGCTTGCCC ATGCAATCAC GACCTGGATG
CCTATCGGTG GAGCTATCGC GCTGGATGCC GAGGTTGGCC TGGCAGCGCT GGCAGACCAC
TTCACCAGCC TGGTGCAGGT CGTACTCCCT GATCAGAGCG TTGCCACTCA CCATGTCACA
CCGGACCATC TTGCAGCCTG GCTGAATGCG CTGGACGACA ACCATCGCAA GGTCTGGCTT
GGCCCAGTGT CTCGGTTGGC ATGGCGAGTC AACTGGGGGC CGGCTCATGA GTGGAAAACA
CACGAAAACA AGCCGATTGC TGCCCGCTCA AGATCAGAAC TGCCTTTGAC CCTCCACCCG
CTTGAACTTG ATCAGCTGCA AGCAGGCATG CACGAGCACT TCGTCCTCTC ATTGGCGCAT
GAGGTCTTGG CCATGCCGCC CCATGCCAAC CATACCTTGG CGGACATACG CCTATGGATA
GAAACACTCC TGCCGCAACT GACAGCCCTC AATTTCCGGA GCGAGGAAGT TGCGGGCCAA
TTCATTCGGC TGATAGCCGG GCACATGTGG CTGATGAGCA ATGACAAGGC GGGAAAAATC
TACACCAACC TCGAAGAGTC GCCCCAGGCC CGCCTTCGCG AACTCCAGGC ACTGGTCGAA
AGCAAGGCGC CTGCCCATGA CTAA
 
Protein sequence
MTTTPSPAPR SEDFAHNCRF LLLMTRAIEY WAYRPIPQEG ELVPAYAPSV LELINAVSRN 
TQKAWLWKNS ALDDRHEFGP LLVDVADAHE LLAHAITTWM PIGGAIALDA EVGLAALADH
FTSLVQVVLP DQSVATHHVT PDHLAAWLNA LDDNHRKVWL GPVSRLAWRV NWGPAHEWKT
HENKPIAARS RSELPLTLHP LELDQLQAGM HEHFVLSLAH EVLAMPPHAN HTLADIRLWI
ETLLPQLTAL NFRSEEVAGQ FIRLIAGHMW LMSNDKAGKI YTNLEESPQA RLRELQALVE
SKAPAHD