Gene Pput_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2115 
Symbol 
ID5192462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2392698 
End bp2395688 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content60% 
IMG OID640586572 
Producthypothetical protein 
Protein accessionYP_001267438 
Protein GI148547336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACG CCTCCGTCAG CCGCGCCACC TCCGGCCCTG CCTGCAGCGC ACGCGTGCCC 
ATCCTGCCAG TGCGCTACGC CATCGTACCC CGCACCGGCG ACGCCCCCGC CTGCCGCTAT
GCCGATGCAG GCTTCAACCT GGAACAAGGC TTTGCCCCGC TGCAGCACTC GGCCTACACC
CTCCGCGCTG TGCGCCCAGG CTATGTCTAC GTGTTCATGA AAGGCCCTCT GGGCGAAAAG
CTGGTCATTC ATGAGCACGT CGGCGCGGGC CTCTACAAGG AGATGCGCTA CCAAGGGCTG
GAGGACTACC ACCGCCGTGA GCGCTACCTG TCTGGCCAGA GCATCGGCTG GGTATGGGCC
GACACCTGCC AGGACACGGC CAAGGAAGTG TGGATCGGCT ACAGCCCGCA CCTGTGGACC
AACGCCATCA CCGCCCGTAT CACCGGTTCG GCAGCCCTGC GCAAACGGCA CATGCGCCAG
CTGGACATGG CCGAGCTGGT GAGCGGCAAC CAGGCGCCGT CCACCCAGCC CCATGTGTTG
CCAGTCAGTG CCCTGCAAAC CTGGGTCGAA GACTTCAAGC CAACCGAGCG GCGCATGCCG
CTGACCTGGA GCAGCGACCC GGTCACCGAA ACCTTGCCCA TCGGCAACCT CAATGCCATC
GCCCGCCACT ACCCCTGGAC CCAGCCGAAA GTGCCAGTGG TGGTGGCGCT CGCCGACGCC
GAAGGCATGG CCCTGGACCT GAGCCTGTCT GTCTCGGCCT ACCAGCATCA ACTGCGTGAC
CTGATGCCGG CCGAGCAACT GGAGCACACA AGACCCGCCC AACCTCCCGA GCAGGAGCGC
GTGCCGGCAT GCTACCGGCT GGATGCCGAA CAGCTCAGCC CACAGAGCCG CGACTTTCAC
CATCGCAACC TGGTCGCCAT GCTGCTGAAC AAGACGCTGG AAAGCCTGTA CCCGGCGGAT
GCACCTTCAC CGGAACTGGC CGCGTTCAGG CTGGGCACGT CACGCCGGGG GCCTGCCCTG
TCGCCGGCCG AGTCCCATTT CCAGGCCCTC ACCCATGAAG ATTACTCCCC CAATGGCGCG
CGCCTGGCAC AGCGCCTCGA TGTCGACAAA TACCGGCGCT TCCTCGCCGA ACGCGACGCG
CTGGAACGAC GGATTGCCGC CCTGCGCAAC CTGGCCTTGC AAGCCAGCAA CGATCATGAC
GCCTGGCTGG CGACGGCCGA ACCCCAACAC ATTGATAACC CCTACAGCCT GGCTGCGGCA
CTGGCCTGTT ACGACCGCGA CGAACGCACC TCCGCCCGCG GTCTGGAAAT CTCACTGGCG
TTGCTGATTC ACCCGATGGG CCAGCCGACA CCCGGCACCG AAGATCATGA CCGGCGTTTC
AAACGCCTGG AGCAATGGCT GGACCAGCAC GACAGCCCGC TTTACACCGC CTTGGCGCCG
TTCAACCCGT TCAAGGACAA AGCCGATTCG ATCGGCGCCA TGTTCGGCGC CAGCGACAAC
GTGATCGAAG GGCTGGCCGG TCGCTTCCCG GCCATGGCGG ACATCACCGA CCTGACCGCC
CAGTCGGTCA ATGCCGTGGT GCTCAAGCGC CTGCGTGGCC AAACCCGTTG GGATGCCAGC
CATGGCCTGC GCCAGCAAGT GTTGCTGGCA GCGCGTGAGG CCAATGCCGA GAAAGCGCTG
GGGTTGTTGG CGGCGCGCTA TCGCATCACC GAGCAGGCCG TTACGGAAAA TCCCTTTAGC
CAGGAGGTGC AGCGGTATTT GAAGAGCGGC ATGGCGCAGG TTGAAGAGAT GAAAGCGTTG
CGCATTTCGG GTAGCCGCAC GGTGTCCATC GAGCTGACCA CCACTGCGCG CGTGAAACCC
AACTTCCTTG GGTTGCTCAC CTCGGGCGGT GGTGGTGGTT TAAACGCGGG GATGCTGTGG
TTCAACATCT TATCGCTCAA GACGGCTTAC AACAGCCTGC AAAAGAGCGA CGCACCGGAA
TACACCATGG GGTTCGCTTC ATCTGTTTTC GGGGTGATTG GTGCAGCGGC GGCAACGTTG
GTCAGCGTAC GGGCAACGCA AAAGGCCGTC ATGCTGAGAT TAAGTGCCAC AGCGCCGGGT
ATGGCCTTTG GCAATGGGGT TATCAAGTTC TTGAGTAGCA ATCTGTTTGC CCGATTAGCC
GGATACCCGG CAATAGCATT TAGCTTGCTT TCTGATATCT CCAAAGCAAG GCGCCAGAGA
GCGAACGGAA ATCAAGCGGC TGCCGATTAC ACGTTGACTG GTGGTTTCAC CATGGCTGTC
GGTTCCGCTG TCGTCCTTGA AGCAGGACTT GCAATTGCAG GCGTGACATC GGTTGTGCCC
TTTGCCGGAT GGGCCGCCGC TGCCCTTGTC CTAGTAGGCG TAGCCATCAT CGCAGGAGGC
CTCTACCTAC ACGCCAAGGC ACATGAACGC CTTCACAGCC CAATAGAACT GTGGGCAGCA
CGTAGCATAT TCGGTAATCG CATCAATGAT GGAGAGTCGC ACGCCGACAT CAACTTGGAC
TTTGACAAGA AGCTGCCTGC TTTCACTTCA CTGCAAACAG AAATTAAGGC TTGGCACAAT
GAACATTACG GACCCAAGCT ACTATCCGCC CAGCAGGCCC TATCCCTCGG CATAACTAAA
GCCGACACCC GATGGCATCA GAATAACCAC TGGTCGCCGC CAAATTGGAC AGCTATCACA
CATAACGAAG TAGCCACATC CCAACCAACC GTAGAATTCA CAGTGCTGCT GCCTGCGTTC
AGGCTAGGCG TAAGTGAATG GTCAGGAAGT TTGAGTTCCC TCCGTGACGA CCAAGGAATT
GACGTTTTTC CAATCAGCCC GACCGGCCAC ATCGTAGATG CTGGCTTAGT TCTACATTTC
GAAAACACCC TAGCCAACCA AAATCATGTC TCACTTCATC TAACTTACCG CGCCAATCAA
GGCCTGGACG AAGACAATGA GACCCTGTCA ATTTTTCGTC TGGAGCGCTG A
 
Protein sequence
MTNASVSRAT SGPACSARVP ILPVRYAIVP RTGDAPACRY ADAGFNLEQG FAPLQHSAYT 
LRAVRPGYVY VFMKGPLGEK LVIHEHVGAG LYKEMRYQGL EDYHRRERYL SGQSIGWVWA
DTCQDTAKEV WIGYSPHLWT NAITARITGS AALRKRHMRQ LDMAELVSGN QAPSTQPHVL
PVSALQTWVE DFKPTERRMP LTWSSDPVTE TLPIGNLNAI ARHYPWTQPK VPVVVALADA
EGMALDLSLS VSAYQHQLRD LMPAEQLEHT RPAQPPEQER VPACYRLDAE QLSPQSRDFH
HRNLVAMLLN KTLESLYPAD APSPELAAFR LGTSRRGPAL SPAESHFQAL THEDYSPNGA
RLAQRLDVDK YRRFLAERDA LERRIAALRN LALQASNDHD AWLATAEPQH IDNPYSLAAA
LACYDRDERT SARGLEISLA LLIHPMGQPT PGTEDHDRRF KRLEQWLDQH DSPLYTALAP
FNPFKDKADS IGAMFGASDN VIEGLAGRFP AMADITDLTA QSVNAVVLKR LRGQTRWDAS
HGLRQQVLLA AREANAEKAL GLLAARYRIT EQAVTENPFS QEVQRYLKSG MAQVEEMKAL
RISGSRTVSI ELTTTARVKP NFLGLLTSGG GGGLNAGMLW FNILSLKTAY NSLQKSDAPE
YTMGFASSVF GVIGAAAATL VSVRATQKAV MLRLSATAPG MAFGNGVIKF LSSNLFARLA
GYPAIAFSLL SDISKARRQR ANGNQAAADY TLTGGFTMAV GSAVVLEAGL AIAGVTSVVP
FAGWAAAALV LVGVAIIAGG LYLHAKAHER LHSPIELWAA RSIFGNRIND GESHADINLD
FDKKLPAFTS LQTEIKAWHN EHYGPKLLSA QQALSLGITK ADTRWHQNNH WSPPNWTAIT
HNEVATSQPT VEFTVLLPAF RLGVSEWSGS LSSLRDDQGI DVFPISPTGH IVDAGLVLHF
ENTLANQNHV SLHLTYRANQ GLDEDNETLS IFRLER