Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2111 |
Symbol | |
ID | 5190545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2386458 |
End bp | 2388713 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586568 |
Product | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding |
Protein accession | YP_001267434 |
Protein GI | 148547332 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.922004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACGC CAGTCGATAC ACCCGCCGAA CTGCTCAGGC TGCAGCGGGG CGAAACGGTC AACCTGTCAC GTCGGCGCTT TCTTGCCGGC ACCGCAGTCG GTGCCCTGGT GCTAGGTTTC GGCCTGCCCA TGGGCTCGGC CCGCGTGCAG GCAGCAGCCG CCGCTGCGGC AACCGCGGAA CGCGGCACCC AGGTGCCTGC ATTTCTGGAG ATTCGCCCGG ACGGCACGGT GCGCCTGCTG AGCCCCTTCA TGGAAGGCGG ACAAGGCCCT TTCACCGCCA TGGCGCAGAT TGTGGGTGAA GAGCTGGATG TCGACCCGGC CCATTTCGTG GTCGATAGCG CACCACCGGG CGAAGCCTAC GTGGTGATGG AGAACGGCAT GCGCATCACC GGTGGCAGCA TGTCGGTGCG CATGAGTTAC CCCACCATGC GCCGTCTGGG CGCGCTCGCC CGGGGCATGC TGCTGCAGGC GGGCGCCGAA CACCTGGGTG TACCGGTCGA TGAGCTTTCT ACCACACCGG GTAACGTAGT ACATACCACG ACCGGACGTT CCGTACCCTA CGGTGAGCTG GCCGGTCGCG CCATGGACCT GCCGGTGCCC GACCCGGCCA GCGTCAAGCT GCGCGACCCC AGCCAGTTTC GCTGGATTGG AAAGCCCGTA CGCCGCCTGG ATGCCTACGA CAAGTCCACC GGCAAGGCCC AGTACTGCAT CGACATCAAA GTCGACGGCA TGCTCCACGC TGCCGTGCAA CATGCGCCGC GCCTGGGCAT GACGGTTGGC AGCCTGCGCA ACGAAGACCA GGTCAAGGCC ATGAAAGGCG TACATTCTGT GCATCAGCTG CCAGGCGCCG TGGCCGTGGT CGCCGAGCGC TGGTGGCACG CCAAGCGTGC AGTGGAGGCG ATGCAGGTGG ACTGGAAAGA ACCGGCCGCC GACAGCAAAG TGCGACCGAT GCCGGCCGAT TTTTCCAGCG ACGCCTGGCG CGAACACCTC GCGACGGTGC AAGGGCCATC CCGTGATGAA GAGAACGAAG GGGATATTGC CGGCGCCTTG GCCAACGCCA AAACCCAGGT CGAGGCCAGC TACCACAACC AGTACCTGAA CCATGCCCAG CTGGAGCCAC CGTCCGCCCT CGCCCGCTTC AACCCGGACG GCAGCCTCGA CGTCTGGCTG CCCAACCAGG CCCCGGACAT GTTCCGTGAC GACATTGCCA GACGCACCGG CCTGGAGCCT GCACAAATCA ACCTGCACTC GCCGCTGCTG GGCGGCTTCT TTGGCCGCCA CTTCCTGTAC GACTCTGCCA ACCCCTACCC GCAGGCCATT GCCCTGGCCA AAGCGGTTGG CCGGCCGGTG AAGCTTATCT GGAGCCGCGA GGAGGAGTTT TTGCGCGATG TACTGCGCCC CGTCGCAGTG GTGAAGTTCC GCGCCGGGCT GGACGCAGAC GGTATGCCAG TGGCGCTCGA AGCGGTAAGC GCCACCGAGG GCCCAACCGA GGCCCTTGCT GGAAAACAAG GGGAGAAGAT CGACCCGACC GCGCTTGAGG GGCTGTCAGG CAAGTCCTAC GCCATCGCCA ACAAGCGCGT TGCCCAGATC TATGTCAAAG GCCCGGCCAT GCTCGGTTAC TGGCGCTCGG TAGGTAACTC GCTGAACGAC TTCTTCTACG AATCATTCCT GGACGAACTG GCTGACAAAG GTGGCAAGGA CCCGTTTGAA CTGCGCCTGC ACCTGCTGCG CGACAACCCG AGACTGACCA ACCTGCTGAA CGCAGTGGCC GACTTGTCCG GCGGCTGGAA GCGCGGACCG TTCACCGCCG AGGACGGCAG CAAGCGCGCA CGCGGCGTGG CCATGGCCTC ACCGTTCGGC TCGGAGGCTG CGGTCATTGC CGAGGTTTCC ATCGACAACG GCCAGGTCAG GGTGCACGAC ATCTGGCAAG CCATCGACCC AGGCAGCATC GTCAACCCGG CGATCATCGA GCATCAGGTC AACGGCGCCG TCGCTCTGGG CCTGTCGCAG ACGCTGGTGG AAGAAGCGGT GTACGTGGAT GGCAAGCCGC GCGCGCGCAA TTATGACCTG TACCCGATTC TGCCGCCTTC GCGCATGGCC CGGGTGCATG TGCGCATCAT CGAAAGCGGG GCGAAGATGG GCGGCATCGG CGAACCACCG CTGCCCGCCG TTGCCCCGGC GGTGGCCAAT GCGGTCGCGC AGCTCACTGG CCAGCGCGTG CGCAGTTTGC CATTGAGCCG CCACACCTTC AGCTGA
|
Protein sequence | MNTPVDTPAE LLRLQRGETV NLSRRRFLAG TAVGALVLGF GLPMGSARVQ AAAAAAATAE RGTQVPAFLE IRPDGTVRLL SPFMEGGQGP FTAMAQIVGE ELDVDPAHFV VDSAPPGEAY VVMENGMRIT GGSMSVRMSY PTMRRLGALA RGMLLQAGAE HLGVPVDELS TTPGNVVHTT TGRSVPYGEL AGRAMDLPVP DPASVKLRDP SQFRWIGKPV RRLDAYDKST GKAQYCIDIK VDGMLHAAVQ HAPRLGMTVG SLRNEDQVKA MKGVHSVHQL PGAVAVVAER WWHAKRAVEA MQVDWKEPAA DSKVRPMPAD FSSDAWREHL ATVQGPSRDE ENEGDIAGAL ANAKTQVEAS YHNQYLNHAQ LEPPSALARF NPDGSLDVWL PNQAPDMFRD DIARRTGLEP AQINLHSPLL GGFFGRHFLY DSANPYPQAI ALAKAVGRPV KLIWSREEEF LRDVLRPVAV VKFRAGLDAD GMPVALEAVS ATEGPTEALA GKQGEKIDPT ALEGLSGKSY AIANKRVAQI YVKGPAMLGY WRSVGNSLND FFYESFLDEL ADKGGKDPFE LRLHLLRDNP RLTNLLNAVA DLSGGWKRGP FTAEDGSKRA RGVAMASPFG SEAAVIAEVS IDNGQVRVHD IWQAIDPGSI VNPAIIEHQV NGAVALGLSQ TLVEEAVYVD GKPRARNYDL YPILPPSRMA RVHVRIIESG AKMGGIGEPP LPAVAPAVAN AVAQLTGQRV RSLPLSRHTF S
|
| |