Gene Pput_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2111 
Symbol 
ID5190545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2386458 
End bp2388713 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content65% 
IMG OID640586568 
Productaldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 
Protein accessionYP_001267434 
Protein GI148547332 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.922004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CAGTCGATAC ACCCGCCGAA CTGCTCAGGC TGCAGCGGGG CGAAACGGTC 
AACCTGTCAC GTCGGCGCTT TCTTGCCGGC ACCGCAGTCG GTGCCCTGGT GCTAGGTTTC
GGCCTGCCCA TGGGCTCGGC CCGCGTGCAG GCAGCAGCCG CCGCTGCGGC AACCGCGGAA
CGCGGCACCC AGGTGCCTGC ATTTCTGGAG ATTCGCCCGG ACGGCACGGT GCGCCTGCTG
AGCCCCTTCA TGGAAGGCGG ACAAGGCCCT TTCACCGCCA TGGCGCAGAT TGTGGGTGAA
GAGCTGGATG TCGACCCGGC CCATTTCGTG GTCGATAGCG CACCACCGGG CGAAGCCTAC
GTGGTGATGG AGAACGGCAT GCGCATCACC GGTGGCAGCA TGTCGGTGCG CATGAGTTAC
CCCACCATGC GCCGTCTGGG CGCGCTCGCC CGGGGCATGC TGCTGCAGGC GGGCGCCGAA
CACCTGGGTG TACCGGTCGA TGAGCTTTCT ACCACACCGG GTAACGTAGT ACATACCACG
ACCGGACGTT CCGTACCCTA CGGTGAGCTG GCCGGTCGCG CCATGGACCT GCCGGTGCCC
GACCCGGCCA GCGTCAAGCT GCGCGACCCC AGCCAGTTTC GCTGGATTGG AAAGCCCGTA
CGCCGCCTGG ATGCCTACGA CAAGTCCACC GGCAAGGCCC AGTACTGCAT CGACATCAAA
GTCGACGGCA TGCTCCACGC TGCCGTGCAA CATGCGCCGC GCCTGGGCAT GACGGTTGGC
AGCCTGCGCA ACGAAGACCA GGTCAAGGCC ATGAAAGGCG TACATTCTGT GCATCAGCTG
CCAGGCGCCG TGGCCGTGGT CGCCGAGCGC TGGTGGCACG CCAAGCGTGC AGTGGAGGCG
ATGCAGGTGG ACTGGAAAGA ACCGGCCGCC GACAGCAAAG TGCGACCGAT GCCGGCCGAT
TTTTCCAGCG ACGCCTGGCG CGAACACCTC GCGACGGTGC AAGGGCCATC CCGTGATGAA
GAGAACGAAG GGGATATTGC CGGCGCCTTG GCCAACGCCA AAACCCAGGT CGAGGCCAGC
TACCACAACC AGTACCTGAA CCATGCCCAG CTGGAGCCAC CGTCCGCCCT CGCCCGCTTC
AACCCGGACG GCAGCCTCGA CGTCTGGCTG CCCAACCAGG CCCCGGACAT GTTCCGTGAC
GACATTGCCA GACGCACCGG CCTGGAGCCT GCACAAATCA ACCTGCACTC GCCGCTGCTG
GGCGGCTTCT TTGGCCGCCA CTTCCTGTAC GACTCTGCCA ACCCCTACCC GCAGGCCATT
GCCCTGGCCA AAGCGGTTGG CCGGCCGGTG AAGCTTATCT GGAGCCGCGA GGAGGAGTTT
TTGCGCGATG TACTGCGCCC CGTCGCAGTG GTGAAGTTCC GCGCCGGGCT GGACGCAGAC
GGTATGCCAG TGGCGCTCGA AGCGGTAAGC GCCACCGAGG GCCCAACCGA GGCCCTTGCT
GGAAAACAAG GGGAGAAGAT CGACCCGACC GCGCTTGAGG GGCTGTCAGG CAAGTCCTAC
GCCATCGCCA ACAAGCGCGT TGCCCAGATC TATGTCAAAG GCCCGGCCAT GCTCGGTTAC
TGGCGCTCGG TAGGTAACTC GCTGAACGAC TTCTTCTACG AATCATTCCT GGACGAACTG
GCTGACAAAG GTGGCAAGGA CCCGTTTGAA CTGCGCCTGC ACCTGCTGCG CGACAACCCG
AGACTGACCA ACCTGCTGAA CGCAGTGGCC GACTTGTCCG GCGGCTGGAA GCGCGGACCG
TTCACCGCCG AGGACGGCAG CAAGCGCGCA CGCGGCGTGG CCATGGCCTC ACCGTTCGGC
TCGGAGGCTG CGGTCATTGC CGAGGTTTCC ATCGACAACG GCCAGGTCAG GGTGCACGAC
ATCTGGCAAG CCATCGACCC AGGCAGCATC GTCAACCCGG CGATCATCGA GCATCAGGTC
AACGGCGCCG TCGCTCTGGG CCTGTCGCAG ACGCTGGTGG AAGAAGCGGT GTACGTGGAT
GGCAAGCCGC GCGCGCGCAA TTATGACCTG TACCCGATTC TGCCGCCTTC GCGCATGGCC
CGGGTGCATG TGCGCATCAT CGAAAGCGGG GCGAAGATGG GCGGCATCGG CGAACCACCG
CTGCCCGCCG TTGCCCCGGC GGTGGCCAAT GCGGTCGCGC AGCTCACTGG CCAGCGCGTG
CGCAGTTTGC CATTGAGCCG CCACACCTTC AGCTGA
 
Protein sequence
MNTPVDTPAE LLRLQRGETV NLSRRRFLAG TAVGALVLGF GLPMGSARVQ AAAAAAATAE 
RGTQVPAFLE IRPDGTVRLL SPFMEGGQGP FTAMAQIVGE ELDVDPAHFV VDSAPPGEAY
VVMENGMRIT GGSMSVRMSY PTMRRLGALA RGMLLQAGAE HLGVPVDELS TTPGNVVHTT
TGRSVPYGEL AGRAMDLPVP DPASVKLRDP SQFRWIGKPV RRLDAYDKST GKAQYCIDIK
VDGMLHAAVQ HAPRLGMTVG SLRNEDQVKA MKGVHSVHQL PGAVAVVAER WWHAKRAVEA
MQVDWKEPAA DSKVRPMPAD FSSDAWREHL ATVQGPSRDE ENEGDIAGAL ANAKTQVEAS
YHNQYLNHAQ LEPPSALARF NPDGSLDVWL PNQAPDMFRD DIARRTGLEP AQINLHSPLL
GGFFGRHFLY DSANPYPQAI ALAKAVGRPV KLIWSREEEF LRDVLRPVAV VKFRAGLDAD
GMPVALEAVS ATEGPTEALA GKQGEKIDPT ALEGLSGKSY AIANKRVAQI YVKGPAMLGY
WRSVGNSLND FFYESFLDEL ADKGGKDPFE LRLHLLRDNP RLTNLLNAVA DLSGGWKRGP
FTAEDGSKRA RGVAMASPFG SEAAVIAEVS IDNGQVRVHD IWQAIDPGSI VNPAIIEHQV
NGAVALGLSQ TLVEEAVYVD GKPRARNYDL YPILPPSRMA RVHVRIIESG AKMGGIGEPP
LPAVAPAVAN AVAQLTGQRV RSLPLSRHTF S