| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2108 |
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| Symbol | |
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| ID | 5195143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2383388 |
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| End bp | 2384029 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586565 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001267431 |
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| Protein GI | 148547329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.451447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCTC ACTCGCTGTT CGCGTTCACC CTGGTCGCCG CCATCGCGAT CGCCAGCCCC
GGCCCTGCCA CCTTGATGGC TATCAACAAC AGCATCGCCC ATGGCCAGCG CAGCGCGATC
TGGTCGTCGC TGGGCAATGG CACAGGCCTG TTCTGTTTGT CGGCTGCGGC CATGTTGGGG
CTAGGCGCAC TGCTGGCCAG TTCTGAAGTA CTGTTCAACG CCGTGAAGAT CCTGGGGGCG
GGCTACCTGT TCTACCTGGG CGCGCGACAA CTGCTGAAGA AGAGCCCGAT GCTGGAGCAG
GGGGCCGCAG AGCGTGCGGC CAAGGTGCGA CCCACGCCGC TGAAACTGTT CAAATCGGCC
TTCCTCACTG CAGTCACCAA CCCCAAGGCG ACCATGTTCT TTACTGCGCT GTTCCCGCAG
TTCATCGACC AGGGCGCTGC GCTGTTGCCG CAGTTCCTGA CCTTGACCGG GATTTTCGTG
GCCTTGTCGC TCACTTCGCT GAGCGCGTAT GCCGCCTTGG CTGCGCGGGC CAAAGGGGTG
TTGACCCGGC CGTCGCTGTC GCGCTGGGTG AACCGGGTGG TGGGCACCAC CTTTATCGGT
TTCGGCGCGG CGATCCTGGC GATGCGACGG CAGGGTGCCT GA
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| Protein sequence | MDSHSLFAFT LVAAIAIASP GPATLMAINN SIAHGQRSAI WSSLGNGTGL FCLSAAAMLG
LGALLASSEV LFNAVKILGA GYLFYLGARQ LLKKSPMLEQ GAAERAAKVR PTPLKLFKSA
FLTAVTNPKA TMFFTALFPQ FIDQGAALLP QFLTLTGIFV ALSLTSLSAY AALAARAKGV
LTRPSLSRWV NRVVGTTFIG FGAAILAMRR QGA
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