Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2088 |
Symbol | |
ID | 5192729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2364054 |
End bp | 2364539 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586546 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001267412 |
Protein GI | 148547310 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000731585 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.792508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACG CAACTGTCTA CAAGAACGTT CTGGGCTCCT TCCCGTCCGG CGTTACCGTC ATCACCACCC AGGACGACGA CGGCTCGGTC GTCGGCCTGA CCGCCAGCGC CTTCTCCTCC CTGTCGATGG ACCCGCCGCT GGTGCTGTTC TGCCCCAACT ACACCTCCGA CTCCTACCCG GTACTGATCA AGCAGAAGCG CTTTGCCATT CACCTGCTGT CCGGTGAACA GCAGGCCGAA GCCTACGCGT TCGCCAAGAA GGGCAAGGAC AAGGCCAGCG GCATCGAGTG GACCCTGAGC GAACTGGGCA ACCCGATCCT GGCCGGTGCC ACCGCCGTCA TCGAATGCGA ACTGTGGCGT GAATATGAAG GTGGCGACCA CGCCATCATG GTCGGCAAGG TACACAACCT GATCGTCCCT GCCGAAGCGC CACGGCCGAT GGTGTACTGC CGCGGCAAGA TGGCCAGCCT GCCGGCCTTT GCCTGA
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Protein sequence | MIDATVYKNV LGSFPSGVTV ITTQDDDGSV VGLTASAFSS LSMDPPLVLF CPNYTSDSYP VLIKQKRFAI HLLSGEQQAE AYAFAKKGKD KASGIEWTLS ELGNPILAGA TAVIECELWR EYEGGDHAIM VGKVHNLIVP AEAPRPMVYC RGKMASLPAF A
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