Gene Pput_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2088 
Symbol 
ID5192729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2364054 
End bp2364539 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID640586546 
Productflavin reductase domain-containing protein 
Protein accessionYP_001267412 
Protein GI148547310 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000731585 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.792508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CAACTGTCTA CAAGAACGTT CTGGGCTCCT TCCCGTCCGG CGTTACCGTC 
ATCACCACCC AGGACGACGA CGGCTCGGTC GTCGGCCTGA CCGCCAGCGC CTTCTCCTCC
CTGTCGATGG ACCCGCCGCT GGTGCTGTTC TGCCCCAACT ACACCTCCGA CTCCTACCCG
GTACTGATCA AGCAGAAGCG CTTTGCCATT CACCTGCTGT CCGGTGAACA GCAGGCCGAA
GCCTACGCGT TCGCCAAGAA GGGCAAGGAC AAGGCCAGCG GCATCGAGTG GACCCTGAGC
GAACTGGGCA ACCCGATCCT GGCCGGTGCC ACCGCCGTCA TCGAATGCGA ACTGTGGCGT
GAATATGAAG GTGGCGACCA CGCCATCATG GTCGGCAAGG TACACAACCT GATCGTCCCT
GCCGAAGCGC CACGGCCGAT GGTGTACTGC CGCGGCAAGA TGGCCAGCCT GCCGGCCTTT
GCCTGA
 
Protein sequence
MIDATVYKNV LGSFPSGVTV ITTQDDDGSV VGLTASAFSS LSMDPPLVLF CPNYTSDSYP 
VLIKQKRFAI HLLSGEQQAE AYAFAKKGKD KASGIEWTLS ELGNPILAGA TAVIECELWR
EYEGGDHAIM VGKVHNLIVP AEAPRPMVYC RGKMASLPAF A