Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2073 |
Symbol | |
ID | 5194738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2348882 |
End bp | 2349610 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640586531 |
Product | nitroreductase |
Protein accession | YP_001267397 |
Protein GI | 148547295 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATTG ATCGCTTGCG CAAATCACCG GTAGGTTCGG ACGAAACTGC CCGTTTGATC GACTGGGCAA TCGTCTCACG TCGGAGCATC AGGTCGTTCC TCCCAACCCC AGTTCCGCGG GAGGAAATTG AAGCGGTTCT GAACGTTGCT CGCTATAGCG CAACAGGCGT CAACCTGCAG CCCTGGAACG TGCATGTTGT TACCGGCGAT ATGAAGGCAC GGTTGTCCGC AGCACTGACT GAGGTTGATG ACCATCCGGC TGATGACCAA CGCTTTTCTG ATCCCTACGC GTATTACCCC AGGGAGTGGA CATCTCCCTA CATCGAACGG CGCAGGGAGG TAGGGTGGGG GCTCTATAGC TTGTTGGGCA TCAGTCGAAG CGATAAACAA AGGATGCACG AGCAACACGG CCGGAATTAT CGCTTCTTCG GGGCGCCTGT TGGCCTGTTC TTCACAATTG ACCGCGTGCT TCAGGAAGGG AGCCTGCTGG ACTATGGCAT GTTCCTGCAA AGCCTCATGA TTGCCGCACG GGGAAGAGGC TTGCACACCT GCCCGCAGGC AGCATTCCTT AAATATCACA GCATCATCAC TGAAATGCTG GCAATACCGA AGAGCCAAAT GCTCGTCTGT GGGATGAGCT TGGGTTATGC CGATGATGGC AGCATTGAGA ACACGTTGGT TACTGGCCGT GAACCCGTGC GTGCATTCAC GACCTTTCAC TCAGAATAA
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Protein sequence | MLIDRLRKSP VGSDETARLI DWAIVSRRSI RSFLPTPVPR EEIEAVLNVA RYSATGVNLQ PWNVHVVTGD MKARLSAALT EVDDHPADDQ RFSDPYAYYP REWTSPYIER RREVGWGLYS LLGISRSDKQ RMHEQHGRNY RFFGAPVGLF FTIDRVLQEG SLLDYGMFLQ SLMIAARGRG LHTCPQAAFL KYHSIITEML AIPKSQMLVC GMSLGYADDG SIENTLVTGR EPVRAFTTFH SE
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