| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2066 |
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| Symbol | |
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| ID | 5190190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2340272 |
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| End bp | 2341531 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586524 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001267390 |
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| Protein GI | 148547288 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.484782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAGGC AACACTGCAA GGCCCCTCTG AAACGTGATC ACGGTCGCAG ACAGTCGGGC
CTTTTCCCGT TAACCAGACA GGCCAATGCG TATATGGCAT TAGATCCACC CACGATGCTG
ACTATTACAG TCGCTTTGGC CGCTGCGGCC GCCTTGTATT TGGCGATTGA ATGGCGGAGT
GTGCGCGAAC CCTCGTTGCT TTACTGGAGT GCGGGTTTCG CCACGATTAC GGTTGGTAGC
ACTCTGGCAT TGTTGCGCGG GATCGGCTTG CTGTTCATCG GTATCTGGTT CGCCAATGGC
TTGCTGGTGG TGGCCCACGT TTTTTTCCTG ATCGGCGTGC TGCGCTTCAC CCAGGAGCGC
TTGTCACGTG CCTGGTTGAT GATCGTGCTG GTCTGGTTCG CCTTGCTGCT GCTGCCCGTG
GGCCCGCAGT GGTCGAAGGT GATGCTGATG GTCAACTCGT TGTTGGTGGC CTCGCTGACG
CTCAAGGCCA GTTTCCTGCT GCGGCCACAT GGTAAATCCC TGAGTGTCGG GGCCGTGCAG
CTGCGCTATG TGTTGCTGAT CCATGGGCTG TTCTATGTGG CCAAGGCGGC CATCGCGATC
ACGCCAGGCA CGCTGATTGA CCTGGCGACC TTTGGCGGGC TGATCATTCA GGTTTCGCTG
GTGGAAGGCG CGATGGCGAT CATGCTGATT GCCTTGTCGA TGACCGGCAC CGTACGTTAC
CGGCGTGAAG AGCGGATTGC CCGGCTGGCC GCCCGTGACC CGCTGACTGC GCTGTACAAC
CGGCGTGCAC TGGAGGTACG GGCGGGGCAT TTCTTCAAGG ACGTGAGCCC GGCGCAACCT
GGGGCATTGC TACTGATCGA CATCGACAAC TTCAAACTGG TCAACGACCT GCACGGGCAT
ATCGCCGGCG ACCGTTTGCT GATTGCCTTG AGCGAGATGA TTCGTACGGC GCTGCCCGAG
CGCTCGCTGG CGGCGCGATT GGGCGGGGAT GAATTCGTCA TCTTGCTCAG TGGCGCGAGC
AGTGAACGGG TCATGGAACT GGGTAGTGGG CTGCGTGAGC AGTTCCAGCA GTACGCCGAC
AAGACCGTGC CTACGCCCCA GGCGGTTACC TTGAGCATTG GTGCCAACGT GTTCGACCAG
CCGCCGGCGA GCCTGGCGGC GTTGATCGAG CAGGGGGATG TGGCGTTGTA CCAATCCAAA
CGTGGGGGGC GCGACAGCAT TCGGTTTTTC GAGCGGACGG TGGTTGAACT CCGGCAGTGA
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| Protein sequence | MCRQHCKAPL KRDHGRRQSG LFPLTRQANA YMALDPPTML TITVALAAAA ALYLAIEWRS
VREPSLLYWS AGFATITVGS TLALLRGIGL LFIGIWFANG LLVVAHVFFL IGVLRFTQER
LSRAWLMIVL VWFALLLLPV GPQWSKVMLM VNSLLVASLT LKASFLLRPH GKSLSVGAVQ
LRYVLLIHGL FYVAKAAIAI TPGTLIDLAT FGGLIIQVSL VEGAMAIMLI ALSMTGTVRY
RREERIARLA ARDPLTALYN RRALEVRAGH FFKDVSPAQP GALLLIDIDN FKLVNDLHGH
IAGDRLLIAL SEMIRTALPE RSLAARLGGD EFVILLSGAS SERVMELGSG LREQFQQYAD
KTVPTPQAVT LSIGANVFDQ PPASLAALIE QGDVALYQSK RGGRDSIRFF ERTVVELRQ
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