| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2063 |
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| Symbol | |
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| ID | 5192424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2336176 |
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| End bp | 2337510 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586521 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001267387 |
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| Protein GI | 148547285 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.667333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCACCCTAGA CCCATCCGCC ATCGCCGGCC CCGCGCACAA CGCCGAACGC
CAGGCGCTGC GCAAGGCCGC CCGGGCCAGC TTCATGGGCA ACTTCGTCGA GTGGTTCGAC
TACGCCGCCT ACGGCTATCT GGCCACCATC ATCGCCGCCA CCTTCTTCCC GCAAACTGAC
AAGACCACCG GCCTGCTGGC TACCTTCGCG GTATTCGCGT TGTCTTTCCT GGTACGCCCG
CTGGGCGGCA TTGTCTGGGG CCATTTCGGC GACCGACACG GTCGGCGCAA CGCGTTGTCG
TGGTCGATCC TGATCATGTC GGTATCCACC TTCTGCATCG GCTTGTTGCC GGGCTATGCG
CAGATCGGGC TGTGGGCACC GGCCTTGCTA TTGCTGATCC GCCTGGTACA GGGGTTTTCC
GCCTCGGGTG AGTACGCCGG GGCCGCTGCG TTCCTGGCCG AGTACGCGCC GCCTGGGCGG
CGTGGCTTGT ACACCAGCAT CGTGCCGGCC AGCACAGCGG CGGGGTTGTT GTTCGGTGCG
GCGTTCGTTG CGGTGCTGCA TGAGCTGCTC AGCAGTGAAG CCCTGCATGA ATGGGGCTGG
CGCCTGCCGT TCCTGCTGGC GGCGCCGTTC GGCCTGGTAG GGCGCTATAT CCGCATGAGC
TTGCAGGACA CGCCCAAGTT CCTGGAGATG GAGCAGCGCC TGGAAACCAA GGCCGGCATG
GCCACGACGC CGCTGCGCGA ACTGCTGGGC CAGCACCGGC GCAGTCTGGC GATCGGCATG
GGTGTCACCT GCCTGAATGC GGTTGCGTTC TACCTGTTGC TCAGTTACAT GCCGACCTAC
CTGTCCAGTG AAATGGGCAT GAGCGAGCGG GATTCGTTCA TCGCCTCGAC GGTGTCGCTG
GCCACCTATA TCGGCTTGAT CTTCCTGATG GGGCGGCTGT CCGACCAGTT TGGTCGCAAG
ACCATGCTGG TGGTGGCCTC GTTGTTGTTC CTGGGGTTGA CCGTGCCGTT GTTTCGCCTG
CTGGACGGCC AGCCGCTGCT GGTGATTCTG GCCATCCAGA TCCTTTTCGG TGCGATGCTG
GCGATGAACG ATGGGACCTT GCCGTGCCTG CTGGCCGAAA TCTTTCCGAC CCGGGTGCGC
TTCAGCGGGT TTGCCCTGAG CTTCAATGTG GCCAATTCGC TGTTTGGCGG GACTGCGCCG
TTCATTGCCA CCTGGCTGAT TCAGGTGACG GGCAGCAAGC TGGCCCCGGC AGGATACCTG
CTGGCGGCAG CGCTGGTGGC GCTGGTGGCC ATGCTGATGT GTCGGGAGAC GGCGCACGCG
GCCCTTGAAG ATTAG
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| Protein sequence | MSSTTLDPSA IAGPAHNAER QALRKAARAS FMGNFVEWFD YAAYGYLATI IAATFFPQTD
KTTGLLATFA VFALSFLVRP LGGIVWGHFG DRHGRRNALS WSILIMSVST FCIGLLPGYA
QIGLWAPALL LLIRLVQGFS ASGEYAGAAA FLAEYAPPGR RGLYTSIVPA STAAGLLFGA
AFVAVLHELL SSEALHEWGW RLPFLLAAPF GLVGRYIRMS LQDTPKFLEM EQRLETKAGM
ATTPLRELLG QHRRSLAIGM GVTCLNAVAF YLLLSYMPTY LSSEMGMSER DSFIASTVSL
ATYIGLIFLM GRLSDQFGRK TMLVVASLLF LGLTVPLFRL LDGQPLLVIL AIQILFGAML
AMNDGTLPCL LAEIFPTRVR FSGFALSFNV ANSLFGGTAP FIATWLIQVT GSKLAPAGYL
LAAALVALVA MLMCRETAHA ALED
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