| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2054 |
|---|
| Symbol | |
|---|
| ID | 5192767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2324932 |
|---|
| End bp | 2325222 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586512 |
|---|
| Product | muconolactone Delta-isomerase |
|---|
| Protein accession | YP_001267378 |
|---|
| Protein GI | 148547276 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4829] Muconolactone delta-isomerase |
|---|
| TIGRFAM ID | [TIGR03221] muconolactone delta-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCC ACGTGAAGAT GACCGTGAAG CTGCCGGTCG ACATGGACCC GGCCAAGGCC
GCCCAGCTCA AAGCCGATGA AAAGGAACTG GCCCAGCGCC TGCAGCGCGA AGGCACCTGG
CGCCACCTGT GGCGCATTGC CGGGCATTAC GCCAACTACA GCGTGTTCGA TGTGCCCAGC
GTCGAGGCGT TGCATGACAC GCTGATGCAG CTGCCGCTGT TCCCGTACAT GGACATCGAG
GTCGACGGCC TGTGTCGGCA TCCCTCGTCT ATTCACAGCG ACGATCGCTG A
|
|---|
| Protein sequence | MLFHVKMTVK LPVDMDPAKA AQLKADEKEL AQRLQREGTW RHLWRIAGHY ANYSVFDVPS
VEALHDTLMQ LPLFPYMDIE VDGLCRHPSS IHSDDR
|
|---|
| |