| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2053 |
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| Symbol | |
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| ID | 5192766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2323793 |
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| End bp | 2324914 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586511 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_001267377 |
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| Protein GI | 148547275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.363775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCG CGCTGATTGA ACACATAGAT GCAATTATCG TCGATCTCCC GACCATTCGC
CCGCACAAGC TGGCGATGCA CACCATGCAG CAGCAGACCC TGGTGGTATT GCGACTGCGC
TGCAGTGATG GCGTGGAAGG CATCGGTGAA GCCACCACCA TCGGTGGCCT GGCGTATGGC
TACGAAAGCC CCGAGGGCAT CAAGGCGAAC ATCGACGCGT ACCTCGCCCC GGCGCTGATC
GGCCTACCGG CAGACAACAT CAATGCCGCC ATGCTCAAGC TGGACAAGCT GGCCAAGGGC
AACACCTTCG CCAAGTCCGG CATCGAAAGC GCCTTGCTCG ACGCCCAGGG CAAACGCCTG
GGCCTGCCGG TCAGCGAACT GCTGGGGGGC CGCGTGCGTG ACAGCCTGGA GGTGGCCTGG
ACCCTGGCCA GCGGCGACAC CGCCCGCGAC ATCGCCGAAG CCCAGCACAT GCTGGACATT
CGCCGGCACC GCGTGTTCAA GCTGAAAATC GGCGCCAACC CGGTGGCGCA GGACCTCAAG
CACGTGGTCG CGATCAAGCG CGAGCTGGGT GACAGCGCCA GCGTGCGGGT CGACGTCAAT
CAGTACTGGG ACGAGTCCCA GGCCCTCCGC GCCTGCCAGG TATTGGGCGA CAACGGCATC
GACCTGATCG AGCAGCCGAT CTCGCGCATC AACCGCGGTG GCCAGGTGCG CCTGAACCAG
CGCAGCCCGG CACCGATCAT GGCCGATGAG TCGATCGAAA GCGTCGAGGA CGCCTTCAGC
CTGGCCGCCG ACGGCGCCGC CAGCATCTTC GCCCTGAAAA TCGCCAAGAA TGGTGGCCCG
CGCGCGGTGC TGCGCACTGC ACAGATCGCC GAGGCCGCTG GCATTGCCTT GTACGGCGGC
ACCATGCTCG AAGGTTCGAT CGGCACCCTG GCTTCGGCCC ACGCATTCCT CACCCTGCGC
CAGCTCACCT GGGGTACAGA GCTGTTCGGG CCGCTGCTGC TGACCGAGGA GATCGTCAAC
GAGCCGCCGC AATACCGCGA CTTCCAGCTG CACATCCCCC ATACCCCAGG CCTGGGCCTG
ACATTGGACG AACAGCGCCT GGCGCGCTTC GCTCGTCGCT GA
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| Protein sequence | MTSALIEHID AIIVDLPTIR PHKLAMHTMQ QQTLVVLRLR CSDGVEGIGE ATTIGGLAYG
YESPEGIKAN IDAYLAPALI GLPADNINAA MLKLDKLAKG NTFAKSGIES ALLDAQGKRL
GLPVSELLGG RVRDSLEVAW TLASGDTARD IAEAQHMLDI RRHRVFKLKI GANPVAQDLK
HVVAIKRELG DSASVRVDVN QYWDESQALR ACQVLGDNGI DLIEQPISRI NRGGQVRLNQ
RSPAPIMADE SIESVEDAFS LAADGAASIF ALKIAKNGGP RAVLRTAQIA EAAGIALYGG
TMLEGSIGTL ASAHAFLTLR QLTWGTELFG PLLLTEEIVN EPPQYRDFQL HIPHTPGLGL
TLDEQRLARF ARR
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