| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2046 |
|---|
| Symbol | |
|---|
| ID | 5195024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2315812 |
|---|
| End bp | 2317224 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267370 |
|---|
| Protein GI | 148547268 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.990392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC CAAGCACAGC ATTCGCTATC GCCCACGACC CGCTGGTGGA GGCCGACAAG
GCCCACTACA TGCACGGCTA CCATGTGTTC GACGAGCACC GCGAGCAAGG CGCGCTGAAC
ATCGTCGCCG GCGAGGGCGC CTACATTCGT GACACCCACG GCAACCGCTT CCTCGATGCC
GTCGGCGGCA TGTGGTGCAC CAACATCGGC CTGGGCCGCG AGGAAATGGC CCTGGCCATC
GCAGACCAGG TGCGCCAGCT GGCGTATTCC AACCCGTTCT CCGACATGGC CAACGACGTG
GCCATCGAAC TGTGCCAGAA GCTTGCGCAG CTGGCGCCGG GCGACTTGAA CCATGTGTTC
CTCACTACCG GCGGCTCGAC CGCTGTCGAC ACCGCCTACC GGCTGATCCA GTACTACCAG
AACTGCCGCG GCAAGCCACA CAAGAAGCAC ATCATCGCCC GCTACAACGC CTACCACGGC
TCCACCACCC TGACCATGTC GATCGGCAAC AAGGCCGCCG ACCGGGTGCC GGAGTTCGAC
TATCACCACG ACCTGATCCA CCACGTCTCC AACCCCAACC CGTACCGTGC CCCGCACGAC
ATGGACGAGG CCGAATTCCT CGACTACCTG GTGGCCGAGT TCGAGGACAA GATCCTGTCG
CTGGGTGCCG ACAACGTGGC GGCGTTCTTC GCCGAGCCGA TCATGGGCTC GGGCGGGGTG
ATCATTCCGC CCGAGGGCTA CTTCCAGCGC ATGTGGCAGC TGTGCCAGAC CTACGACATC
CTGTTCGTCG CCGACGAAGT GGTGACCTCG TTCGGGCGCC TGGGCACCTT CTTCGCCAGC
GAGGAACTGT TTGGCGTCAC CCCAGACATC ATCACCACCG CCAAAGGCCT GACCTCGGCG
TACCTGCCGC TGGGCGCGTG TATTTTTTCC GAGCGCATCT GGCAAGTGAT TGCCGAGCCA
GGCAAGGGTC GTTGCTTTAC CCACGGGTTT ACCTACAGCG GCCACCCGGT GTGCTGCACG
GCGGCGCTGA AGAACATCGA GATCATCGAG CGCGAGCAAC TGCTCGATCA TGTCAACGAT
GTGGGGGGTT ACCTTGAGCA ACGCTTGCAG AGCCTGCGCG ATCTGCCGCT GGTGGGGGAT
GTGCGCTGCA TGAAGCTGAT GGCCTGTGTC GAGTTCGTCG CCAACAAGGC CAGCAAGGCA
CTGTTCGCCG ATGAGGTGAA CATCGGCGAA CGCATCCACA GCAAGGCGCA GGAAAAAGGG
TTGCTGGTGC GCCCGATCAT GCACCTGAAC GTGATGTCGC CACCGTTGAT CATCACCCAT
GCGCAGGTGG ACGAGATCGT CGAGACCCTG CGCCAGTGTA TCCTCGAAAC CGCGCGTGAA
CTCACGGCGC TTGGCCTGTA CCAAGGCCGA TGA
|
|---|
| Protein sequence | MATPSTAFAI AHDPLVEADK AHYMHGYHVF DEHREQGALN IVAGEGAYIR DTHGNRFLDA
VGGMWCTNIG LGREEMALAI ADQVRQLAYS NPFSDMANDV AIELCQKLAQ LAPGDLNHVF
LTTGGSTAVD TAYRLIQYYQ NCRGKPHKKH IIARYNAYHG STTLTMSIGN KAADRVPEFD
YHHDLIHHVS NPNPYRAPHD MDEAEFLDYL VAEFEDKILS LGADNVAAFF AEPIMGSGGV
IIPPEGYFQR MWQLCQTYDI LFVADEVVTS FGRLGTFFAS EELFGVTPDI ITTAKGLTSA
YLPLGACIFS ERIWQVIAEP GKGRCFTHGF TYSGHPVCCT AALKNIEIIE REQLLDHVND
VGGYLEQRLQ SLRDLPLVGD VRCMKLMACV EFVANKASKA LFADEVNIGE RIHSKAQEKG
LLVRPIMHLN VMSPPLIITH AQVDEIVETL RQCILETARE LTALGLYQGR
|
|---|
| |