| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2045 |
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| Symbol | |
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| ID | 5195023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2314674 |
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| End bp | 2315777 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586503 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001267369 |
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| Protein GI | 148547267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.76929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG TACTGAAGGT GATTGGCGGT CTGCTGCTGG CGTCTGGCGC CAGCCTGGCC
CAGGCGGCAG AGGTGGACAG TGGTAACACG TTACGGTTGT ACAACTGGAC CGACTACATC
GGTGAAACCA CCCTGGCCGA CTTCGAGAAG GCCACCGGCA TCAAGGTCAT CTACGACACC
TTCGATGGCT ACGAAACCGT GCAGACCAAA CTGCTCACCG GCCGTTCCGG CTACGACCTG
GTCATGCTCA ACGCCTCGCT GGTCCCCCCG CTGATCAGCG CCGGCGTGTT CCAGGCACTG
GACAAGCAGC AACTGCCTAG CTGGCAAAAC CTCGATCAGC AGGTGGTCAA CAACCTGCAG
GGCTACGACC CTGGCCTGAA GTACTCGGCG CCCTATACCT GGGGCAGCTC GGGGGTCACC
TACAACGTCG ACAAGATCAC CGCGCGCATG CCCGACGCGC CGATCGGTTC GCTGGCCATG
CTGTTCGACC CCAAGATCGT CTCGCGCTTC GCCGACTGCG GCGTCACCCT GATGGACGCG
CCCACCGAGG TCATTCCGCT GGCCCTGCAG TACCTGGGCA AGGACCCACG CAGCGCGTCG
CCTGCCGACC TCAAGGCGGC CGAGCAACTG CTGCTGGGCA TCCGCCCCTA CATTCGCAAG
TTCGACTCGG TCAACTACCT CACCAGCCTG CCCAACGGCG ATGTCTGCCT GGCGCTGACC
TGGTCCGGTG ACTACGCCAC CGCCCAGGCC CGCGCGGTGG AAGCGAAGAA GGACATCAAA
CTGTCGTTCT TCATCCCCCA GGAAGGTTCG CTGATCTGGT TCGACAACCT GTACATCCCC
AAGGATGCGC CGCACGCGGC CAACGCCCAC CGCTTCATCG AGTTTCTGCT GCAGCCGCAG
ACCATGGCCA AGGTCACTGA CTACATCCAC TACGCCAACA GCAACGCCGC CGCCACCGCG
CTGGTGCGTG ACGACATCCG CCAGGACCCG GCCATCTACC CCGACGCACA AACCCGTGAG
CGCCTGTTCG CGCAGAAAAC CCAGAGCCCC AAGGACATGC GCGCCATCAC CCGGGTCTGG
AGCACGGTCA AGACCGGTTT CTGA
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| Protein sequence | MRKVLKVIGG LLLASGASLA QAAEVDSGNT LRLYNWTDYI GETTLADFEK ATGIKVIYDT
FDGYETVQTK LLTGRSGYDL VMLNASLVPP LISAGVFQAL DKQQLPSWQN LDQQVVNNLQ
GYDPGLKYSA PYTWGSSGVT YNVDKITARM PDAPIGSLAM LFDPKIVSRF ADCGVTLMDA
PTEVIPLALQ YLGKDPRSAS PADLKAAEQL LLGIRPYIRK FDSVNYLTSL PNGDVCLALT
WSGDYATAQA RAVEAKKDIK LSFFIPQEGS LIWFDNLYIP KDAPHAANAH RFIEFLLQPQ
TMAKVTDYIH YANSNAAATA LVRDDIRQDP AIYPDAQTRE RLFAQKTQSP KDMRAITRVW
STVKTGF
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