Gene Pput_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2042 
Symbol 
ID5191532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2310797 
End bp2311987 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content67% 
IMG OID640586500 
Productaminotransferase, class I and II 
Protein accessionYP_001267366 
Protein GI148547264 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.366261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACG CCAAGCTCAC CCAACGCATC GCCGGCGACG GCGCCGCGGC CTGGGACATC 
CACTACCGCG CCCTGGCGCT GCAGGCCGAG GGCAAGGACA TCCTGCTGCT GTCGGTGGGT
GACCCGGACT TCGACACTCC CGCGCCTATC GTCGAGGCGG CCATCGACAG CCTGCGCGCT
GGCCATACCC ATTACGCCGA TGTACGCGGC AAGCTGGCGC TGCGCCAGGC CATCGCCAAC
CGTCACCGGC AGCGCAGTGG CCAGGCGGTG AGCGTCGACC AGGTGACCGT GCTGGCGGGT
GCCCAGTGCG CGCTGTTCTG CGTGGCCCAG TGCATACTCG ACCCAGGCGA TGAGGTGATC
GTTGCCGAAC CGATGTATGT CACTTACGAG GCCGTGTTCG GCGCCTGTGG CGCCAAGGTG
GTACCGGTAC CGGTCAAGCC CGAGAATGGC TTTCGCGTGT GCCCGCGTGA CGTCGCCGAG
CGCATTACCC CGCGCACCCG CGCTTTGGCG CTGAACAGCC CGCACAACCC TTCGGGGGCG
AGCCTGCCGC GCGCCACTTG GGAGGCGCTG GCCGAACTGT GCATTGCCTA TGATCTGTGG
CTGATCTCTG ACGAGGTCTA CAGCGAACTG CTGTATGAAG GCGAGCATGT CAGCCCCGGC
AGCCTGCCGG GCATGGCCGA GCGCACTGCA ACGTTGAACA GCCTGTCCAA GTCGCATGCC
ATGACCGGCT GGCGCATGGG GTGGGTGGTC AGCTCGACAG CACTGGCCAC GCATCTGGAA
AACCTCGCCC TGTGCATGCT CTACGGCTTG CCGGACTTCG TCCAGGATGC CGCCGTGGTG
GCGCTGGAGC AGCCGTTGCC CGAGCTGGAC GCCATGCGCG AAGCCTACCG CGAGCGGCGC
GATCTGGTGT GCGAGCAGTT GGCCGGCTGC CCGGGCCTCA AGGCATTGAA GCCCGATGGT
GGCATGTTCG TGATGGTCGA CATCCGTGAA ACCGGCCTTA GCGCCCAGGC TTTCGCCGAC
TACCTGTTGG ACAGCCAAGG CGTGTCGGTG CTCGCCGGCG AGGCATTCGG CCCGAGCGCT
GCCGGGCATA TCCGCCTGGG CCTGGTGCTG GGCAATGAGG CGCTGGCCGA TGCCTGCCAG
CGCATCGCCC GCTGCGCCGG CGAGCTGATG CAGGGGCAGA CCGATGCGTG A
 
Protein sequence
MRYAKLTQRI AGDGAAAWDI HYRALALQAE GKDILLLSVG DPDFDTPAPI VEAAIDSLRA 
GHTHYADVRG KLALRQAIAN RHRQRSGQAV SVDQVTVLAG AQCALFCVAQ CILDPGDEVI
VAEPMYVTYE AVFGACGAKV VPVPVKPENG FRVCPRDVAE RITPRTRALA LNSPHNPSGA
SLPRATWEAL AELCIAYDLW LISDEVYSEL LYEGEHVSPG SLPGMAERTA TLNSLSKSHA
MTGWRMGWVV SSTALATHLE NLALCMLYGL PDFVQDAAVV ALEQPLPELD AMREAYRERR
DLVCEQLAGC PGLKALKPDG GMFVMVDIRE TGLSAQAFAD YLLDSQGVSV LAGEAFGPSA
AGHIRLGLVL GNEALADACQ RIARCAGELM QGQTDA