Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2042 |
Symbol | |
ID | 5191532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2310797 |
End bp | 2311987 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586500 |
Product | aminotransferase, class I and II |
Protein accession | YP_001267366 |
Protein GI | 148547264 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.366261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACG CCAAGCTCAC CCAACGCATC GCCGGCGACG GCGCCGCGGC CTGGGACATC CACTACCGCG CCCTGGCGCT GCAGGCCGAG GGCAAGGACA TCCTGCTGCT GTCGGTGGGT GACCCGGACT TCGACACTCC CGCGCCTATC GTCGAGGCGG CCATCGACAG CCTGCGCGCT GGCCATACCC ATTACGCCGA TGTACGCGGC AAGCTGGCGC TGCGCCAGGC CATCGCCAAC CGTCACCGGC AGCGCAGTGG CCAGGCGGTG AGCGTCGACC AGGTGACCGT GCTGGCGGGT GCCCAGTGCG CGCTGTTCTG CGTGGCCCAG TGCATACTCG ACCCAGGCGA TGAGGTGATC GTTGCCGAAC CGATGTATGT CACTTACGAG GCCGTGTTCG GCGCCTGTGG CGCCAAGGTG GTACCGGTAC CGGTCAAGCC CGAGAATGGC TTTCGCGTGT GCCCGCGTGA CGTCGCCGAG CGCATTACCC CGCGCACCCG CGCTTTGGCG CTGAACAGCC CGCACAACCC TTCGGGGGCG AGCCTGCCGC GCGCCACTTG GGAGGCGCTG GCCGAACTGT GCATTGCCTA TGATCTGTGG CTGATCTCTG ACGAGGTCTA CAGCGAACTG CTGTATGAAG GCGAGCATGT CAGCCCCGGC AGCCTGCCGG GCATGGCCGA GCGCACTGCA ACGTTGAACA GCCTGTCCAA GTCGCATGCC ATGACCGGCT GGCGCATGGG GTGGGTGGTC AGCTCGACAG CACTGGCCAC GCATCTGGAA AACCTCGCCC TGTGCATGCT CTACGGCTTG CCGGACTTCG TCCAGGATGC CGCCGTGGTG GCGCTGGAGC AGCCGTTGCC CGAGCTGGAC GCCATGCGCG AAGCCTACCG CGAGCGGCGC GATCTGGTGT GCGAGCAGTT GGCCGGCTGC CCGGGCCTCA AGGCATTGAA GCCCGATGGT GGCATGTTCG TGATGGTCGA CATCCGTGAA ACCGGCCTTA GCGCCCAGGC TTTCGCCGAC TACCTGTTGG ACAGCCAAGG CGTGTCGGTG CTCGCCGGCG AGGCATTCGG CCCGAGCGCT GCCGGGCATA TCCGCCTGGG CCTGGTGCTG GGCAATGAGG CGCTGGCCGA TGCCTGCCAG CGCATCGCCC GCTGCGCCGG CGAGCTGATG CAGGGGCAGA CCGATGCGTG A
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Protein sequence | MRYAKLTQRI AGDGAAAWDI HYRALALQAE GKDILLLSVG DPDFDTPAPI VEAAIDSLRA GHTHYADVRG KLALRQAIAN RHRQRSGQAV SVDQVTVLAG AQCALFCVAQ CILDPGDEVI VAEPMYVTYE AVFGACGAKV VPVPVKPENG FRVCPRDVAE RITPRTRALA LNSPHNPSGA SLPRATWEAL AELCIAYDLW LISDEVYSEL LYEGEHVSPG SLPGMAERTA TLNSLSKSHA MTGWRMGWVV SSTALATHLE NLALCMLYGL PDFVQDAAVV ALEQPLPELD AMREAYRERR DLVCEQLAGC PGLKALKPDG GMFVMVDIRE TGLSAQAFAD YLLDSQGVSV LAGEAFGPSA AGHIRLGLVL GNEALADACQ RIARCAGELM QGQTDA
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