| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2041 |
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| Symbol | alr |
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| ID | 5191531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2309543 |
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| End bp | 2310772 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586499 |
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| Product | alanine racemase |
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| Protein accession | YP_001267365 |
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| Protein GI | 148547263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.29605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC GCCGTACACT TCTGGCCGCA TCCCTGGCCC TGCTGATCAC CGGCCAAGCC
CCACTGTATG CCGCCCCCCC GTTGTCGATG GACAACGGTA CCAACGCCCT GACCGTGCAA
AACAGCAATG CCTGGGTCGA AGTCAGCGCC AGCGCCCTGC AGCACAACAT CCGCACGCTG
CAGGCCGAGC TGGCCGGCAA GTCCAAGCTG TGCGCCGTGC TCAAGGCCGA TGCCTATGGC
CACGGTATCG GCCTGGTAAT GCCATCGATC ATCGCCCAGG GCGTGCCCTG CGTGGCGGTG
GCCAGCAACG AGGAGGCCCG CGTGGTCCGC GCCAGTGGCT TCACCGGGCA ACTGGTGCGG
GTACGCCTGG CCAGCCTAAG CGAGCTGGAA GATGGCTTGC AGTACGACAT GGAAGAGCTG
GTGGGCAGCG CGGAATTTGC CCGCCAGGCC GATGCCATCG CCGCGCGCCA TGGCAAGACC
TTGCGCATTC ACATGGCGCT CAACTCCAGC GGCATGAGCC GCAACGGGGT GGAGATGGCC
ACCTGGTCCG GCCGTGGCGA AGCGCTGCAG ATCACCGACC AGAAGCACCT CAAGCTGGTC
GCGCTGATGA CCCACTTCGC CGTGGAAGAC AAGGACGATG TCCGCAAGGG CCTGGCGGCC
TTCAACGAGC AGACCGACTG GTTGATCAAG CACGCGAAGC TCGACCGCAG CAAGCTCACC
CTGCACGCCG CCAACTCGTT CGCTACGCTG GAGGTGCCGG AAGCGCGCCT GGACATGGTA
CGAACGGGGG GCGCGCTGTT CGGCGACACC GTGCCGGCGC GCACCGAGTA CAAGCGTGCG
ATGCAGTTCA AATCGCACGT GGCTGCGGTG CACAGCTATC CGGCTGGCAA CACCGTGGGC
TATGACCGCA CCTTCACCCT GGCCCGTGAT TCGCGCCTGG CCAACATTAC GGTCGGGTAC
TCCGACGGCT ACCGCCGGGT ATTCACCAAC AAGGGCCATG TGCTGATCAA CGGCCACCGT
GTGCCGGTGG TGGGCAAGGT GTCGATGAAC ACGCTGATGG TCGATGTCAC CGACTTCCCG
GACGTGAAGG GGGGCAACGA AGTGGTGCTG TTCGGCAAGC AGGCCGGGGG CGAAATCACC
CAGGCCGAGA TGGAAGAAAT CAACGGCGCG TTGCTCGCCG ATCTGTACAC CGTATGGGGC
AGTTCCAACC CGAAGATCCT CGTCGACTGA
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| Protein sequence | MPFRRTLLAA SLALLITGQA PLYAAPPLSM DNGTNALTVQ NSNAWVEVSA SALQHNIRTL
QAELAGKSKL CAVLKADAYG HGIGLVMPSI IAQGVPCVAV ASNEEARVVR ASGFTGQLVR
VRLASLSELE DGLQYDMEEL VGSAEFARQA DAIAARHGKT LRIHMALNSS GMSRNGVEMA
TWSGRGEALQ ITDQKHLKLV ALMTHFAVED KDDVRKGLAA FNEQTDWLIK HAKLDRSKLT
LHAANSFATL EVPEARLDMV RTGGALFGDT VPARTEYKRA MQFKSHVAAV HSYPAGNTVG
YDRTFTLARD SRLANITVGY SDGYRRVFTN KGHVLINGHR VPVVGKVSMN TLMVDVTDFP
DVKGGNEVVL FGKQAGGEIT QAEMEEINGA LLADLYTVWG SSNPKILVD
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