Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2039 |
Symbol | |
ID | 5193187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2305791 |
End bp | 2307908 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586497 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_001267363 |
Protein GI | 148547261 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCAAT CGATTCGTGA CAACCTCAAG CGCCTGCTGG CGCCCCGGCA CCTGGCCTTC GTTGGCGGGC GCAGCATGGC GCGGGCGCTC AAGCGCTGCG CCGAAGGCGG CTTTGGCGGT GAGCTGTGGC TGGTCAACCC GCAGCATGAA AGCCTGGAAG GCATCCCTTG CGTGGCCCGC GTGGCCGACT TGCCTTACGC CCCGGACGCG GTGTTCATCG CCACCAACCG TGAGCTGACG TTGCAGTGCG TTGCCGAGCT GGCCGCGCGT GGCGCCGGGG GTGCCATCTG CTATGCCTCC GGCTTTGCCG AAAGCGGCGA AGAGGGCTGC CAGTTGCAGC AGCGCCTGCT CGCTGCGGCC GGCAACATGG CCCTGCTCGG CCCCAACTGC TATGGCCTGC TCGACTACCT GCACGGTGCA GCCCTTTGGC CGGTGGCCCA TGGCGGCCAG CAGGTGGAGA AGGGCGTGGC GATCCTCACC CAGAGCGGCA ACTTTGCCTA CAACCTGTCC ATGAGCGACC GCTCGCTGCC GGTGGCCTAC ATGGCCTCGG TCGGCAACCA GGCGCAACTG GGTGTGGCCG AGCTGATGGA TGTGCTGCTC GACGACCCAC GGGTAACGGC CATCGGGTTG CACCTGGAAG GCTTGAAGAA CGTGCCGGGC TTTGCACGCG CCGCCTACAA GGCATTGCAG CAGGGTACGC CGATCATTGC ATTGAAGACG GGCGTTTCGC AGATCGGCGC TGAACTGGCG CTCAGCCACA CCAGCTCGTT GTCCGGCTCC GATGCGTTGT ACGACAGCCT GTTCCAGCGC CTGGGCGTGA TCCGCGTCAG CGGCCCGGTG AGCTTTGTCG AAACGCTCAA GGCCGCAGCC TGCGGACGCT TGCCGGCAGA TGGCGAGCTG ATTGCGCTGG CCTGCTCAGG CGGCGATGCC GGCCTGATTG CCGACTATGC CGAACGCCAC CATCTGCAAC TGCCGAAGCT CGAGCAAGGG CAGGTGGCGG CACTGGCCGA GGTGTTGCCG GGCTATGCCA ACCTGGTCAA CCCACTGGAC TTCACCACTG CCATCTGGGG CGATGAGGCC GCCCTGCAAC GCATGCTCGA CAGTACCCTG AGCGGCGCCG CGGGCGCGGC GATGCTGGTG CTGGACTACC CGGCGGCGTT CACCGGCGAG CGCAAGGAAT GTGACCTGCT GCTGGGGCTA TACTGCGATG CCGTTGAACG CCACGGCAAG ATCGGCTTCG TCACCTCGGC TTTCCCGGAA CTGTTGCCTG CCAGTGCGCG TGAGCGCCTG CATGCGCGGG GCATCGCAGC CCTGCAGGGC GTGGAAGATG GCCTGGCGGC CTGGGGGCGC ATCGTCGCTT ACCAAAGGAA CCGCCAGCGG TTGCTGGACC AGGGCGAGGC TGCGCGGGTA CCGCTGTGCC CGCAGGCCCT CACGGGCGAA AGCCGACTGT TGGACGAATG GCAATCCAAG CAGGCCCTGC GCGCCTTCGG TCTGCCGGTG CCGGCAGGTG TGCTGAGTAC GCCCGAGCGC GCTGTGGCAG ACGCTGCCCG CGTGGGTTAC CCGCTGGTAC TGAAGGCGGT CAGCGCACAG CTGCCGCACA AGACCGAAGC CGGTGCGGTG GCGCTGAACC TGCGTGATGC CGCCGCCCTG GAAGCTGCAC TGTTGCAGAT GCGCCAGCGC ATCGCTGCCT ACGCCCCGCA CGTCGCGTTC GACCAGGTAC TGCTCGAACC CATGGCCGAG CCGCCGCTGG CCGAGCTGAT AGTGGGCATC AAACGTGAAC ACGACTTTGC CCTGGCCTTG GTGATCGGTG CCGGCGGCGT GCTGGTCGAA CTACTCAAGG ACAGTGTCAG CCTGTTGTTG CCCACCACCG ACAGCGCCAT CCGCGCCGCA CTGCTGAACC TGCGCAGTGC CAGCCTGCTG CAAGGCTTCC GTGGCCGCCC GGCTGCCGAC CTCGACGCCT TGGTCGCAGC TATCCGTGCG GTGGCCGACT ACGCCTGCGA AAACGCCGGG CAGCTGTTGG AGCTGGATGT GAACCCATTG ATGGTCGGTG CCCACGGCAC CACCGCGGTC GACGCGCTGA TCCGCCTCGG CCAGGCGCAA GGAGAACGAC ATGAATGA
|
Protein sequence | MSQSIRDNLK RLLAPRHLAF VGGRSMARAL KRCAEGGFGG ELWLVNPQHE SLEGIPCVAR VADLPYAPDA VFIATNRELT LQCVAELAAR GAGGAICYAS GFAESGEEGC QLQQRLLAAA GNMALLGPNC YGLLDYLHGA ALWPVAHGGQ QVEKGVAILT QSGNFAYNLS MSDRSLPVAY MASVGNQAQL GVAELMDVLL DDPRVTAIGL HLEGLKNVPG FARAAYKALQ QGTPIIALKT GVSQIGAELA LSHTSSLSGS DALYDSLFQR LGVIRVSGPV SFVETLKAAA CGRLPADGEL IALACSGGDA GLIADYAERH HLQLPKLEQG QVAALAEVLP GYANLVNPLD FTTAIWGDEA ALQRMLDSTL SGAAGAAMLV LDYPAAFTGE RKECDLLLGL YCDAVERHGK IGFVTSAFPE LLPASARERL HARGIAALQG VEDGLAAWGR IVAYQRNRQR LLDQGEAARV PLCPQALTGE SRLLDEWQSK QALRAFGLPV PAGVLSTPER AVADAARVGY PLVLKAVSAQ LPHKTEAGAV ALNLRDAAAL EAALLQMRQR IAAYAPHVAF DQVLLEPMAE PPLAELIVGI KREHDFALAL VIGAGGVLVE LLKDSVSLLL PTTDSAIRAA LLNLRSASLL QGFRGRPAAD LDALVAAIRA VADYACENAG QLLELDVNPL MVGAHGTTAV DALIRLGQAQ GERHE
|
| |