Gene Pput_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2035 
Symbol 
ID5190363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2299691 
End bp2301943 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content65% 
IMG OID640586493 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001267359 
Protein GI148547257 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC TGCGCACCGA TGGCCTGCTG CGCCGCCTGC TGCTGTTCAT CCTGCTGTTC 
AGCTTGTGCT TCACGGTACT GGCCAGCGGC GTGCAGCTGT ACTTCGAGTA CCGTCGCGAA
ATGCGGGATA TTGAGGCACG CATGGCGTTG ATCCGCGCCG GCTACCTGGC CAGCCTGGAG
CGCAGCCTGT GGGACCTCGA CGAGGCGCAG CTGGATGTTC AGTTGCGCGG CCTGGTGGAC
TTTTCCGATG TGGCGCGGGT GCGTCTGGTC AGTGATGATT TCACATTGTT ACGCGGTGAG
GCCGAGCCCC AAGGGCCGCT GCGCATCGAG CGCTTCCCTC TCGACTATCA GCCGCCCTCA
GGGCCGGTCA GGCACCTGGG CGAACTGGAA GTCAGCATCG ACCTTGGCGC GGTACACCGG
CGGCTTTACG CCACGGGCCT TGCCAGCCTG TTGTGGATGG GTGTGTTTCT GTGCGGCCTG
GCAGTGGCGC TGTCAGGGCT GTTCTACCGC CTGGTCACCC GCCACCTGCA AGTGATGGCC
GAGTTCGCCC GCCGCATTGG CGCCGGCCAG TGGCAGGAGC CGTTGCGCCT TGGCCGCCGC
CGATCATCGC GCCCCGACGA AATCGACACG GTGGCCAATG CCCTGGACGA TATGCGTCGC
GCCATCCTCA GCGATATCGA GCGCCGGGAG CGTGACCGCC TGGAACTGCA GGACAAACGC
GACGAATTGC AGGCCATGGT CGAGCGGCGT ACGGCCAGCC TGGCTCGGGC CAAGGACGAG
GCCGAGGCTG CCAACCTGGC CAAGTCGCGT TTTTTGGCGA CCATGAGCCA TGAATTGCGC
ACGCCGCTCA ACGGTATTCT GGGCATGGCC GAACTGCTGC GCGGCGGGCG CCTGGAGGTC
GCCGACCGCC AGCGTGTCGA GGCCTTGTAC AAGGCTGGCG AAGGGCTGTT GGCGATTCTC
AACGAAGTGC TGTATTTCGC CCGGCTCGAA GAAGGCGAGA GCCGCGCCGA ACGGGTGGTG
TTTTCCTTGC GTCAGTTGTG CCAGGAAGTG CTGGCGTTGC TCGAACCCAT GGCCATGGAG
AATGCCGACA CCCTGCAACT GCAGGTCGAT GAGCAACTGG CCGCGTACCA GTACGGCGCA
GAGCAGTACC TGCGACAGGT GCTGAGCAAT CTGCTGGCCA ACGCCATCAA GTTCACTGAG
TACGGCCAGG TACAGCTTAC GGTACAGGTG CTTGCCAATA ACGAGTGCTC GCAGCGCTTG
CGGCTATCGG TCCGTGACAA TGGTATCGGT ATCGAGCCCG CCGTTCAGGC GAAGATCTTC
GACCGTTTCG TCCAGGCCAG CGAAGCTGTG ACCCAGCGCT ATGGCGGCAC TGGCCTGGGC
CTGGCGACCT GCAAACACCT GGTGGAAAAG CTGGGCGGTA GCATCGGCCT TGAGAGCGTT
CAAGGGCAGG GCAGCTGCTT TTGGTTCGAA CTCGACATGG CTCGCGGGCA GCCTGTCTCA
GCGGGTCTAC CAGCCCCTTC GCCCTTGCCC AGCCTGGATA TCCTGGTGGT CGAAGACGTT
GCCCTGAACC GTGAGGTTGC CGGTGGCCTG CTGCTGCGGG ACGGTCATCG GATAAGCTTT
GCCGAAGATG CCGGCCAAGC CCTGCAGGCA TGCGCGCAGC GGCGCTTCGA CCTGGTTCTG
CTGGACGTGC ACTTGCCGGG CATGAGCGGG GTGGCGTTGT GCCGACAGCT GCGTAGCTCG
CCGGGGCCGA ACCGCGACAG TCGGATCCTG GCGCTGACGG CCGGCGTGCA ACCGGGCCAG
GTCGCGGGTT ATCTGGACGC TGGCATGCAG GGCGTACTGG CCAAACCGTT GCGGCTGGAT
AACCTGCGCA AGGCGTTGGC TGACGTAGCG CCCGGTGAAG TGGCCAGCGC TGGCGCAGAC
ATGGACTGGT CATTGCTCGA CACCCACCGT TCACTGCTGG GGGAGCAGAA GTTGCAAGGC
CTGCTGAAGG TCCTGCGCCA GTCACTGCAG CAGCACGCCA CGGCGCTGGC CGAGGCGCTA
CCAGCCCAGG ACTTCACCGA AGTGCTGCAC CTGGCCCACC GCCTGGCTGG CAGTTGCGAT
TCCCTGGGGT TTACCGGGCT GGCGACGGTG TTGCGTGGTC TGGAGGAGGC GGCCCGGCAG
CATGACGTAC AGGCCATGCA AGCCCTCGGC GAGCCGTTGG CTACCCAGCT AGGTCAGGCC
AGTGCCACGC TGGAACAGTT GATCCAGAGC TGA
 
Protein sequence
MIRLRTDGLL RRLLLFILLF SLCFTVLASG VQLYFEYRRE MRDIEARMAL IRAGYLASLE 
RSLWDLDEAQ LDVQLRGLVD FSDVARVRLV SDDFTLLRGE AEPQGPLRIE RFPLDYQPPS
GPVRHLGELE VSIDLGAVHR RLYATGLASL LWMGVFLCGL AVALSGLFYR LVTRHLQVMA
EFARRIGAGQ WQEPLRLGRR RSSRPDEIDT VANALDDMRR AILSDIERRE RDRLELQDKR
DELQAMVERR TASLARAKDE AEAANLAKSR FLATMSHELR TPLNGILGMA ELLRGGRLEV
ADRQRVEALY KAGEGLLAIL NEVLYFARLE EGESRAERVV FSLRQLCQEV LALLEPMAME
NADTLQLQVD EQLAAYQYGA EQYLRQVLSN LLANAIKFTE YGQVQLTVQV LANNECSQRL
RLSVRDNGIG IEPAVQAKIF DRFVQASEAV TQRYGGTGLG LATCKHLVEK LGGSIGLESV
QGQGSCFWFE LDMARGQPVS AGLPAPSPLP SLDILVVEDV ALNREVAGGL LLRDGHRISF
AEDAGQALQA CAQRRFDLVL LDVHLPGMSG VALCRQLRSS PGPNRDSRIL ALTAGVQPGQ
VAGYLDAGMQ GVLAKPLRLD NLRKALADVA PGEVASAGAD MDWSLLDTHR SLLGEQKLQG
LLKVLRQSLQ QHATALAEAL PAQDFTEVLH LAHRLAGSCD SLGFTGLATV LRGLEEAARQ
HDVQAMQALG EPLATQLGQA SATLEQLIQS