Gene Pput_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2030 
Symbol 
ID5190660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2295509 
End bp2296564 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content64% 
IMG OID640586488 
Productsecreted hydrolase-like protein 
Protein accessionYP_001267354 
Protein GI148547252 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA ATGCGTTGCT GTTGCTGAGC GGGTTGTTGT GCGGCTGTGA TCAGCCAGCA 
CCGCAGAGCT ATGCCGGGCT CGGGCAGCAG GCTGGCGAGT TTAGCCAGGT GACCCGCGAT
CATCGTCTGG TATTCCCGCA TGACCACGGT CCCCACGACG GCTTTCGTAT CGAGTGGTGG
TATGTCACCG CTAACCTCAA GGACACCCAG GGCCGAGATT GGGGTGCCCA GTGGACACTG
TTCCGCTCAG CCCTGCGCCC CGGCCTGGAG ACCACCGACT GGAACAGCCC GAACCTCTGG
ATGGGGCATG CAGCACTGAC CGGGCCGGGT GGCCATCAGG CTGCTGAAAC CCTGGCGCGG
GGTGGTGTCG GCCAGGCCGG CGCGCAGGCC CAGCCGTTTC GCGCATGGAT CAATGACTGG
GTGTTACAGG GCCAGGGCGG TATTGAACAG CTACAGATGG TCGCAAGTGG TGACGGTTTT
CGCTATGACT TGCAGTTGCA CAGCGATCTT CCCTTGGTGC TGCATGGTGA GCAGGGCTAC
AGCGAAAAAT CAGGCAAGGG CCAGGCTTCG TACTATTACA GCCAGCCGTT CTACCAGGTC
CAGGGGCAGG TCCAGCGTGG CAGCCTGTGC ATCGCGGTTA CCGGGCAGGC CTGGCTGGAC
CGGGAATGGA GCAGTCAGCC GCTGGCGCCC GGGCAGACCG GCTGGGACTG GTTTTCCCTG
CACCTGGACA GTGGCGCCAA GCTGATGCTG TTCCAGGTAC GGGAGGCCCA CGGGGAACCG
TATCGCGCCG GGACCTGGGT AGGGCCACAG GGGGAGGTGG TGGCGCTGGA CGCCGCACAG
ATCCGCCTGC AGGCGCTGGC CTGGTCTGCG CAGAAAAACG GCAAGCAGGT GCCCACGCGT
TGGCGGGTGC AAGTGCCGGA GCATGGGGTG GATGTGCAGG TCGATGCCGT TGAGCCGCAG
GCGTGGATGC AGACACGGTT CCCGTATTGG GAAGGGCCGG TACGCTTGAA CGGGAGTGCG
GGCGGGCGCG GGTATCTGGA GATGACCGGG TACTAG
 
Protein sequence
MKLNALLLLS GLLCGCDQPA PQSYAGLGQQ AGEFSQVTRD HRLVFPHDHG PHDGFRIEWW 
YVTANLKDTQ GRDWGAQWTL FRSALRPGLE TTDWNSPNLW MGHAALTGPG GHQAAETLAR
GGVGQAGAQA QPFRAWINDW VLQGQGGIEQ LQMVASGDGF RYDLQLHSDL PLVLHGEQGY
SEKSGKGQAS YYYSQPFYQV QGQVQRGSLC IAVTGQAWLD REWSSQPLAP GQTGWDWFSL
HLDSGAKLML FQVREAHGEP YRAGTWVGPQ GEVVALDAAQ IRLQALAWSA QKNGKQVPTR
WRVQVPEHGV DVQVDAVEPQ AWMQTRFPYW EGPVRLNGSA GGRGYLEMTG Y