Gene Pput_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2027 
Symbol 
ID5193815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2291046 
End bp2292113 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID640586485 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001267351 
Protein GI148547249 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCTA AAAACACCTG GTACGTCGCC TGCACCCCCG ACGAAATCGC CACCAAACCC 
CTGGGCCGGC AGATCTGCGG GGAAAAAATC GTGTTCTACC GCGCCCGAGA GAACCAAGTC
GCCGCCGTCG AGGACTTCTG CCCGCACCGC GGCGCACCGT TGTCGTTGGG CTATGTCGAG
GACGGCAACC TGGTGTGCGG CTACCACGGC CTGGTCATGG GTTGCGACGG CAAGACCGTG
TCGATGCCGG GCCAACGGGT GCGTGGCTTC CCCTGCAACA AGACCTTTGC GGCCGTCGAG
CGCTATGGCT TCATCTGGGT CTGGCCCGGT GACCAGGCGC AGGCCGACCC GGCGCTGATT
CCGCATCTGG AATGGGCGGT GAATGATGAG TGGGCCTACG GCGGCGGGCT GTTCCACATC
GGTTGCGACT ACCGCCTGAT GATCGACAAC CTCATGGACC TCACCCATGA AACCTATGTG
CACGCGTCCA GCATCGGCCA GAAGGAGATC GACGAGGCAC CGCCGGTCAC CACCGTCACC
GGCGACGAAG TGGTCACCGC CCGGCACATG GAAAACATCA TGGCGCCGCC GTTCTGGCGC
ATGGCCTTGC GTGGCAACGG CCTGGCCGAC GATGTACCGG TGGACCGCTG GCAGATCTGC
CGTTTCACCC CACCTAGCCA TGTGCTGATC GAAGTGGGTG TAGCGCATGC CGGCAAGGGC
GGCTACCACG CCGAGGCACA GCACAAGGCA TCGAGCATCG TGGTCGACTT CATCACTCCG
GAAAGCGATA CCTCTATCTG GTACTTCTGG GGCATGGCGC GCAATTTCGC TGCGCACGAC
CAGACCCTGA CCGACAACAT TCGTGAGGGC CAGGGCAAGA TTTTCAGCGA AGACCTGGAA
ATGCTCGAAC GTCAGCAGCA AAACCTGCTG GCCTACCCCG AGCGCAACTT GCTGAAGCTG
AACATCGATG CCGGCGGCGT GCAGTCACGC AAAGTGCTGG AGCGGATCAT CGCCAAAGAG
CGGGCGCCGC AGCCGCAACT GATCGCCACC AGCGCCACCC CTGCCTGA
 
Protein sequence
MYPKNTWYVA CTPDEIATKP LGRQICGEKI VFYRARENQV AAVEDFCPHR GAPLSLGYVE 
DGNLVCGYHG LVMGCDGKTV SMPGQRVRGF PCNKTFAAVE RYGFIWVWPG DQAQADPALI
PHLEWAVNDE WAYGGGLFHI GCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAPPVTTVT
GDEVVTARHM ENIMAPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG
GYHAEAQHKA SSIVVDFITP ESDTSIWYFW GMARNFAAHD QTLTDNIREG QGKIFSEDLE
MLERQQQNLL AYPERNLLKL NIDAGGVQSR KVLERIIAKE RAPQPQLIAT SATPA