Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2027 |
Symbol | |
ID | 5193815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2291046 |
End bp | 2292113 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586485 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001267351 |
Protein GI | 148547249 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCCTA AAAACACCTG GTACGTCGCC TGCACCCCCG ACGAAATCGC CACCAAACCC CTGGGCCGGC AGATCTGCGG GGAAAAAATC GTGTTCTACC GCGCCCGAGA GAACCAAGTC GCCGCCGTCG AGGACTTCTG CCCGCACCGC GGCGCACCGT TGTCGTTGGG CTATGTCGAG GACGGCAACC TGGTGTGCGG CTACCACGGC CTGGTCATGG GTTGCGACGG CAAGACCGTG TCGATGCCGG GCCAACGGGT GCGTGGCTTC CCCTGCAACA AGACCTTTGC GGCCGTCGAG CGCTATGGCT TCATCTGGGT CTGGCCCGGT GACCAGGCGC AGGCCGACCC GGCGCTGATT CCGCATCTGG AATGGGCGGT GAATGATGAG TGGGCCTACG GCGGCGGGCT GTTCCACATC GGTTGCGACT ACCGCCTGAT GATCGACAAC CTCATGGACC TCACCCATGA AACCTATGTG CACGCGTCCA GCATCGGCCA GAAGGAGATC GACGAGGCAC CGCCGGTCAC CACCGTCACC GGCGACGAAG TGGTCACCGC CCGGCACATG GAAAACATCA TGGCGCCGCC GTTCTGGCGC ATGGCCTTGC GTGGCAACGG CCTGGCCGAC GATGTACCGG TGGACCGCTG GCAGATCTGC CGTTTCACCC CACCTAGCCA TGTGCTGATC GAAGTGGGTG TAGCGCATGC CGGCAAGGGC GGCTACCACG CCGAGGCACA GCACAAGGCA TCGAGCATCG TGGTCGACTT CATCACTCCG GAAAGCGATA CCTCTATCTG GTACTTCTGG GGCATGGCGC GCAATTTCGC TGCGCACGAC CAGACCCTGA CCGACAACAT TCGTGAGGGC CAGGGCAAGA TTTTCAGCGA AGACCTGGAA ATGCTCGAAC GTCAGCAGCA AAACCTGCTG GCCTACCCCG AGCGCAACTT GCTGAAGCTG AACATCGATG CCGGCGGCGT GCAGTCACGC AAAGTGCTGG AGCGGATCAT CGCCAAAGAG CGGGCGCCGC AGCCGCAACT GATCGCCACC AGCGCCACCC CTGCCTGA
|
Protein sequence | MYPKNTWYVA CTPDEIATKP LGRQICGEKI VFYRARENQV AAVEDFCPHR GAPLSLGYVE DGNLVCGYHG LVMGCDGKTV SMPGQRVRGF PCNKTFAAVE RYGFIWVWPG DQAQADPALI PHLEWAVNDE WAYGGGLFHI GCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAPPVTTVT GDEVVTARHM ENIMAPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG GYHAEAQHKA SSIVVDFITP ESDTSIWYFW GMARNFAAHD QTLTDNIREG QGKIFSEDLE MLERQQQNLL AYPERNLLKL NIDAGGVQSR KVLERIIAKE RAPQPQLIAT SATPA
|
| |