Gene Pput_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2021 
Symbol 
ID5190970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2283125 
End bp2283751 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID640586479 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001267345 
Protein GI148547243 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.203063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT ACAGGCTGCA TTGCTTCGCC GAATCCGGCA ACGCCTACAA GGCTGCGCTC 
ATGCTTGAAC TCACCGGCCA GAACTGGCAG CCGGTGTTCG TCGACTTCTT CCATGGCCAG
ACGCGTGAGC AGACCTGGCG CGATGAGGTG AATGAGCAGG GCGAGGTGCC GGTGATGGAA
CACGCTGGCA AGCGCTTCAC CCAGTCTGCG CTGATCCTCG AATACCTTGC CGAACAGACC
GGCCAGTTCG GGCCTCGCGA TGAAGATGAA AAGCGTGAGA TCTGGCGGTG GATGCTGTTC
GACAACCATA AGTTCACCAG CTATTACGCT GCGCTGCGCT TTCTGTTCTG CCTGAAGAAC
ACCGGCGAAA CCGATGTCAC GCGGTTCCTG CGCGAGCGTG CCACGGCGGC TTACCGTATT
GTCGACGCGC ACCTGGCGAA GACGCCATTC ATGGTTGGTG GTCGGTTGAC CATCGCCGAC
CTGTCGTTGG CGGGGTATGT GTTCATGCCA GAAGACACCG GTATCCCGTT GGCAGCGTTC
ACGCACATCG AGGCCTGGAA AGCCCGTATC CAGGCGCTGC CGGGGTGGAA ACACCCGTAT
GAGCTGATGC CGCGCACGGC ATCCTGA
 
Protein sequence
MSDYRLHCFA ESGNAYKAAL MLELTGQNWQ PVFVDFFHGQ TREQTWRDEV NEQGEVPVME 
HAGKRFTQSA LILEYLAEQT GQFGPRDEDE KREIWRWMLF DNHKFTSYYA ALRFLFCLKN
TGETDVTRFL RERATAAYRI VDAHLAKTPF MVGGRLTIAD LSLAGYVFMP EDTGIPLAAF
THIEAWKARI QALPGWKHPY ELMPRTAS