Gene Pput_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2019 
Symbol 
ID5194477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2281702 
End bp2282466 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID640586477 
ProductDNA-binding transcriptional regulator GlcC 
Protein accessionYP_001267343 
Protein GI148547241 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.230363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACTG AAGGCAAGGC CAAGGTCGCC GACCAGGTGG CCGAGCGGGT CGAGCGGCTT 
ATCGTCGAAG GCGTGCTCAA GGTGGGCCAG GCACTGCCGT CGGAGCGGCG GCTGGTGGAA
AAGCTTGGCT GTTCACGTTC GGCCTTGCGC GAGGGCCTGC GCATTCTGCG TGGGCGCGGC
ATCATCGACA CTGAACAGGG GCGGGGTTCG TTCGTCGCCG ATCTCACCGG GCAGGCGGGT
GCTACGCCTT TGATGCACCT GTTCAGTTCG CAACCGCGCA CGCTGTTCGA CCTGCTGGAG
GTCAGGGCGT TGCTGGAGGC TGAGTCGGCG CGGCTGGCGG CGTTGCGGGC TACCGACGTC
GACCGCCTGC TGATCCGCCG GCGCTACGAA GAAATGCTGG CTGCGCACGA GGCTGCGCAG
GCGCTCGATG CCCGTGAGCA TGCCCGCCGT GACCATGCCT TTCACCGGGC GATCAGTGAG
GCGTCGCATA ACCCGGTGCT GGTGCATACC CTGCAATCGC TCAGTGACCT GACGTTGAGC
ACGGTGTTTG CGTCGGTCAA CAACTTGTAC TGCCGGCCAG CGCAGAAACG CCAGATTGAT
CGGCAGCATG CGCGGTTGTA CCGCGCAGTC ATGGAGCAAC TGCCCGAGCA GGCGCAGCGG
GCGGCGCGTG AGCATATCAA CGGCATACGC GACAGTTTGC GGGAGATCGA GCAGGAAGAG
CAGCGCCTGG TCAGGGCGAC CATGCGTATG GATGGCTGGG GGTGA
 
Protein sequence
MGTEGKAKVA DQVAERVERL IVEGVLKVGQ ALPSERRLVE KLGCSRSALR EGLRILRGRG 
IIDTEQGRGS FVADLTGQAG ATPLMHLFSS QPRTLFDLLE VRALLEAESA RLAALRATDV
DRLLIRRRYE EMLAAHEAAQ ALDAREHARR DHAFHRAISE ASHNPVLVHT LQSLSDLTLS
TVFASVNNLY CRPAQKRQID RQHARLYRAV MEQLPEQAQR AAREHINGIR DSLREIEQEE
QRLVRATMRM DGWG