Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2019 |
Symbol | |
ID | 5194477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2281702 |
End bp | 2282466 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586477 |
Product | DNA-binding transcriptional regulator GlcC |
Protein accession | YP_001267343 |
Protein GI | 148547241 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.230363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTACTG AAGGCAAGGC CAAGGTCGCC GACCAGGTGG CCGAGCGGGT CGAGCGGCTT ATCGTCGAAG GCGTGCTCAA GGTGGGCCAG GCACTGCCGT CGGAGCGGCG GCTGGTGGAA AAGCTTGGCT GTTCACGTTC GGCCTTGCGC GAGGGCCTGC GCATTCTGCG TGGGCGCGGC ATCATCGACA CTGAACAGGG GCGGGGTTCG TTCGTCGCCG ATCTCACCGG GCAGGCGGGT GCTACGCCTT TGATGCACCT GTTCAGTTCG CAACCGCGCA CGCTGTTCGA CCTGCTGGAG GTCAGGGCGT TGCTGGAGGC TGAGTCGGCG CGGCTGGCGG CGTTGCGGGC TACCGACGTC GACCGCCTGC TGATCCGCCG GCGCTACGAA GAAATGCTGG CTGCGCACGA GGCTGCGCAG GCGCTCGATG CCCGTGAGCA TGCCCGCCGT GACCATGCCT TTCACCGGGC GATCAGTGAG GCGTCGCATA ACCCGGTGCT GGTGCATACC CTGCAATCGC TCAGTGACCT GACGTTGAGC ACGGTGTTTG CGTCGGTCAA CAACTTGTAC TGCCGGCCAG CGCAGAAACG CCAGATTGAT CGGCAGCATG CGCGGTTGTA CCGCGCAGTC ATGGAGCAAC TGCCCGAGCA GGCGCAGCGG GCGGCGCGTG AGCATATCAA CGGCATACGC GACAGTTTGC GGGAGATCGA GCAGGAAGAG CAGCGCCTGG TCAGGGCGAC CATGCGTATG GATGGCTGGG GGTGA
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Protein sequence | MGTEGKAKVA DQVAERVERL IVEGVLKVGQ ALPSERRLVE KLGCSRSALR EGLRILRGRG IIDTEQGRGS FVADLTGQAG ATPLMHLFSS QPRTLFDLLE VRALLEAESA RLAALRATDV DRLLIRRRYE EMLAAHEAAQ ALDAREHARR DHAFHRAISE ASHNPVLVHT LQSLSDLTLS TVFASVNNLY CRPAQKRQID RQHARLYRAV MEQLPEQAQR AAREHINGIR DSLREIEQEE QRLVRATMRM DGWG
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