| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2018 |
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| Symbol | |
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| ID | 5191790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2280008 |
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| End bp | 2281507 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586476 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001267342 |
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| Protein GI | 148547240 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.252442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC TGTATGACGA ACGCGTCGAT GGCGCGCTGC CCAACGTGGA CCTGGCCGCC
CTGTTGCAGG CGCTGCGCGA TGCACTGCCG GACCTTGAAA TCCTGCACCG CGATGAAGAC
CTCAAACCGT ACGAATGCGA CGGCCTGTCG GCCTACCGCA CCGTGCCACT GCTGGTGGCG
CTGCCCGAGC GCCTGGAGCA GGTGCAGACG CTGTTGAAGC TTTGCCACCA GCGCGGCGTA
CCGGTGGTTG CGCGTGGCGC CGGTACCGGC CTGTCTGGTG GTGCCCTGCC GCTGGCCAAG
GGCATCCTGC TGGTGATGGC GCGCTTCAAC CGTATCCTCG AGGTCAACCC GCAGGGGCGT
TACGCCCGCG TGCAACCGGG CGTACGCAAC CTGGCCATCT CCCAGGCCGC CGCACCCCAT
GGCATGTATT ACGCACCCGA CCCTTCCTCG CAAATTGCCT GCTCGATCGG CGGCAACGTC
GCCGAAAACG CCGGTGGCGT GCACTGCCTC AAGTACGGCC TGACCGTACA CAATGTGCTC
AAGGTGGAAA TCCTTACGGT CGAGGGCGAA CGCCTGAGCC TCGGCAGCGA TGCCTTGGAC
AGCCCCGGCT TCGACCTGCT GGCATTGTTC ACCGGCTCCG AAGGCATGCT CGGTATCGTC
ACCGAAGTCA CCGTCAAGCT GCTGCCCAAG CCCCAGGTGG CGCGGGTGAT ACTGGCCAGT
TTCGACAGCG TCGAGGACGC TGGCCGGGCA GTTGCCGACA TCATCGCTGC CGGCATCATT
CCCGGCGGCC TGGAGATGAT GGACAACCTG GCGATCCGCG CCGCTGAAGA CTTCATCCAT
GCCGGCTACC CGGTGGACGC GGCGGCGATC CTGCTGTGCG AACTGGATGG CGTGGAAGCC
GATGTTCACG ACGACTGCGC GCGCGTCGCC GCCGTGCTGA CCCAAGCCGG GGCCCGCGAG
GTACGCCTGG CCTGCGACGA AGCCGAGCGT GTTCGCTTCT GGGCCGGGCG CAAGAACGCC
TTCCCGGCCG TGGGGCGCCT CTCCCCGGAC TACTACTGCA TGGACGGCAC CATCCCGCGC
CGCGAGTTAC CACGGGTGCT CAAGGGCATC AGCGACCTGT CCGCGGAGTA CGGCCTGCGG
GTCGCCAATG TGTTCCATGC CGGCGACGGC AACATGCACC CTTTGATCCT GTTCGATGCC
AACCTGCCCG GCGAGCTGGC GCGTGCCGAA GCGATCGGCG GCAAGATTCT GGAACTGTGT
GTGAAGGTGG GCGGCAGCAT CACCGGTGAA CACGGCGTGG GGCGCGAGAA GATCAACCAG
ATGTGCGCGC AGTTCAACAG CGACGAAATT ACCCTGTTCC ACGCGGTGAA GGCCGCCTTC
GACCCCCAGG GCCTGCTCAA CCCCGGCAAG AACATTCCCA CCCTGCACCG CTGCGCCGAA
TTCGGCGCCC TGCACGTGCA CCAGGGGCAA CTGCCCTTCC CCGAGCTGGA GCGCTTCTGA
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| Protein sequence | MNILYDERVD GALPNVDLAA LLQALRDALP DLEILHRDED LKPYECDGLS AYRTVPLLVA
LPERLEQVQT LLKLCHQRGV PVVARGAGTG LSGGALPLAK GILLVMARFN RILEVNPQGR
YARVQPGVRN LAISQAAAPH GMYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNVL
KVEILTVEGE RLSLGSDALD SPGFDLLALF TGSEGMLGIV TEVTVKLLPK PQVARVILAS
FDSVEDAGRA VADIIAAGII PGGLEMMDNL AIRAAEDFIH AGYPVDAAAI LLCELDGVEA
DVHDDCARVA AVLTQAGARE VRLACDEAER VRFWAGRKNA FPAVGRLSPD YYCMDGTIPR
RELPRVLKGI SDLSAEYGLR VANVFHAGDG NMHPLILFDA NLPGELARAE AIGGKILELC
VKVGGSITGE HGVGREKINQ MCAQFNSDEI TLFHAVKAAF DPQGLLNPGK NIPTLHRCAE
FGALHVHQGQ LPFPELERF
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