| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2017 |
|---|
| Symbol | glcE |
|---|
| ID | 5191789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2278956 |
|---|
| End bp | 2280008 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640586475 |
|---|
| Product | glycolate oxidase FAD binding subunit |
|---|
| Protein accession | YP_001267341 |
|---|
| Protein GI | 148547239 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG AGCGCGACAT GAGCCAGACG CTGTTGGAGC AGGTCAACCA GGCGCTGAAC
GAAGGTACGC CGCTGCGTAT CCAGGGCAGC AACAGCAAAG CGATGCTCGG CAACCCGGTG
GCCGGCGAAG TACTCGACAC CCGCAACCAC CGCGGCATTG TCAGCTACGA CCCCACCGAG
CTGGTACTCA CGGCCCGCGC CGGTACCCCC CTGCGCGAGA TCGAGGCCGC CCTGCACGAG
GCCGGCCAGA TGCTGCCCTG CGAACCACCC CACCTGGGCC CCGAGGCCAC CTTGGGCGGC
ATGGTCGCGG CCGGGTTGTC TGGCCCGCGA CGGCCGTGGG CCGGGTCGGT GCGCGACTTT
GTACTGGGTA CACGGGTGAT CACCGGCCAC GGCAAGCTGC TGCGCTTTGG TGGCGAGGTG
ATGAAGAACG TCGCCGGCTA CGATGTGTCA CGCCTGATGG CAGGCAGCTT CGGATGCCTG
GGGCTGCTGA CCGAGGTTTC GCTGAAAGTG CTGCCACGGC CGCGCCTGTG CCTGAGCCTG
CGCCTGCCGA TGGGCCGCAA TGAAGCGCTG GCCGAGCTGG CCGAATGGGG CCAGCAACCG
CTCCCGATCA GCGCCGCCTG CCATGACAGC GAAACGCTGT ACCTGCGCCT GGAAGGCGGC
GAAGGGTCGG TGCAATCGGC ACGCCAGCGG TTGGGGGGCG AAACGCTCGA TAACCGCTTC
TGGCGCGACC TGCGCGAGCA GCGCCTGGCG TTCTTTGCCG ACGCCGCCCC CCTGTGGCGC
CTGTCCGTAC CCACCGTCAC CGGCGAGCTG GACCTGCCCG GCCAGCAACT GATCGACTGG
GGGGGTGCCC AGCGCTGGCT CAAGACCTGC GCACCGGCGC AGGCCATTCG CGACCAGGTC
GCCAGGGTGG GCGGCCACGC CACCTGCTAC GCCCCCGGTG CAGCCAGCAG CCCGCCGCTG
CCGGTTGCAC TGATGCGCTA TCACCGCGCC CTCAAGCAGC AGCTCGATCC CCAGGGGGTG
TTCAACCCTG GTCGCCTGTA CCCGGACCTG TGA
|
|---|
| Protein sequence | MSMERDMSQT LLEQVNQALN EGTPLRIQGS NSKAMLGNPV AGEVLDTRNH RGIVSYDPTE
LVLTARAGTP LREIEAALHE AGQMLPCEPP HLGPEATLGG MVAAGLSGPR RPWAGSVRDF
VLGTRVITGH GKLLRFGGEV MKNVAGYDVS RLMAGSFGCL GLLTEVSLKV LPRPRLCLSL
RLPMGRNEAL AELAEWGQQP LPISAACHDS ETLYLRLEGG EGSVQSARQR LGGETLDNRF
WRDLREQRLA FFADAAPLWR LSVPTVTGEL DLPGQQLIDW GGAQRWLKTC APAQAIRDQV
ARVGGHATCY APGAASSPPL PVALMRYHRA LKQQLDPQGV FNPGRLYPDL
|
|---|
| |