| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2016 |
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| Symbol | glcF |
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| ID | 5193166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2277711 |
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| End bp | 2278946 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586474 |
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| Product | glycolate oxidase iron-sulfur subunit |
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| Protein accession | YP_001267340 |
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| Protein GI | 148547238 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA ACCTTAGCGA AACCTCGCGC CGCCTGGCCC GCGCCGACGA AGCCGAGCGC
ATCCTGCGCA CCTGCGTACA TTGCGGTTTC TGCACCGCCA CCTGCCCCAC TTACCAGTTG
CTGGGCGACG AACTGGACGG CCCGCGCGGG CGCATCTACC TGATCAAGCA GATGCTCGAA
GGCGAGCCGG TCACCGCCAG CACCCAATTG CACCTGGACC GCTGCCTGAC CTGCCGCAAC
TGCGAAACCA CCTGCCCATC GGGGGTGAAG TACCACGACC TGCTGGACAT CGGCCGCGCA
GTGGTCGAGC AGCAGGTGCC ACGCCCACTC GGCCAGCGCC TGTTGCGCCT GGGCCTGCGT
GCGGTGGTGC CGCGCCCGGC ACTGTTCAAG GCCCTGACCC GCAGCGGCCA GGCGTTGCGC
CCGCTGCTAC CGGCCTCACT CAAACGCAAG TTGCCGGCGC AGGTCACCAC ACCCGGCCAG
CGTCCGGCAG TGCGCCATGC GCGCCGGGTA CTGATGCTGG AAGGTTGCGT GCAGCCAGCC
CTGTCACCCA ATACCAATGC CGCGGCTGCG CGGCTGCTCG ACCGCCTGGG CATCAGTGTG
CAACCCATCC TGCAGGCCGG ATGCTGTGGC GCGGTGGACT ATCACCTGAA TGCTCAGGCG
CAAGGCCTGC AGCGGGCACG GCGCAATATC GACGCCTGGT GGCCCGCCAT CGAAGCGGGT
GCCGAGGCGA TCGTGCAGAC CGCCAGCGGC TGCGGCGCGT TTGTCCGCGA CTATGGCCAT
CTGCTGGAGA AAGACCCCCA TTACGCTGCC AAGGCGGCAC GGGTCAGTGC ACTTTCCCGC
GATCTGGTGG AAATCCTGCG CGATGAGCCA ATCGAACAAT TGGCCCTGTG CGCCGAACAG
CGCCTGGCCT TCCACTGCCC ATGCACCCTG CAGCACGCAC TGAAGCTGGG CGGCGCGGTA
GAGGCGCTGC TGACACGGCT TGGCTTTACC CTGACCTCGG TGCCCGATGG CCACCTGTGC
TGCGGCTCGG CAGGGACCTA TTCGCTGACC CAACCTGAAC TGTCACTGCA ACTTCGCGAC
AATCGTCTGA ATGCGCTGGA AAGCGGTAAA CCGCACATCA TTGCCACGGC CAACATAGGC
TGCCAGGCCC ACCTCGATGG GGCTGGACGC ACACCCGTGC GCCACTGGAT CGAAATCGTC
GAAGCCGCCT TGAACCCGGA GCCCGCCCAT GCTTAG
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| Protein sequence | MQTNLSETSR RLARADEAER ILRTCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQMLE
GEPVTASTQL HLDRCLTCRN CETTCPSGVK YHDLLDIGRA VVEQQVPRPL GQRLLRLGLR
AVVPRPALFK ALTRSGQALR PLLPASLKRK LPAQVTTPGQ RPAVRHARRV LMLEGCVQPA
LSPNTNAAAA RLLDRLGISV QPILQAGCCG AVDYHLNAQA QGLQRARRNI DAWWPAIEAG
AEAIVQTASG CGAFVRDYGH LLEKDPHYAA KAARVSALSR DLVEILRDEP IEQLALCAEQ
RLAFHCPCTL QHALKLGGAV EALLTRLGFT LTSVPDGHLC CGSAGTYSLT QPELSLQLRD
NRLNALESGK PHIIATANIG CQAHLDGAGR TPVRHWIEIV EAALNPEPAH A
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