Gene Pput_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2015 
Symbol 
ID5193165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2277320 
End bp2277718 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID640586473 
Producthypothetical protein 
Protein accessionYP_001267339 
Protein GI148547237 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGCA AGTTCGTTAT CGGCCAGACC GAAATCGCCC GCGTACTGAC CGCCGCCCGC 
CAGGAAGCCC AGGCCCGCCA ATGGAGCGTG ACCATCGCCG TGGTCGACGA CGGCGGCCAC
CCACTGGCCC TGGAACGCCT GGACGGCTGC GCACCGGCCA GTGCCTACAT CGCGATGGAA
AAGGCCCGCA CCGCCGCACT GGGGCGCAAA GAGACGCGGG ATTATGAAGA CATGGTCAAT
GGCGGCCGCA CGGCCTTCGT GACCGCTCCC CTGCTGACCA GCCTTGAAGG TGGCGTGCCG
CTGCGGGTGG AAGGCCAGGT GGTGGGCGCC ATTGGTGTAT CCGGCGTCAA ATCCGAACAG
GATGCCCAGG TGGCCAAGGC GGGGGCTGCT GCCTTGTAG
 
Protein sequence
MLSKFVIGQT EIARVLTAAR QEAQARQWSV TIAVVDDGGH PLALERLDGC APASAYIAME 
KARTAALGRK ETRDYEDMVN GGRTAFVTAP LLTSLEGGVP LRVEGQVVGA IGVSGVKSEQ
DAQVAKAGAA AL