| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2013 |
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| Symbol | |
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| ID | 5193992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2275318 |
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| End bp | 2276814 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586471 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001267337 |
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| Protein GI | 148547235 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAGCC CTGAGTCGCA GCCGATCCGC TATCCTGAGC AATCCTCCGC TCCGGACCCG
CCCATGGAAC TGCACATTCG CCTGGAGGGC CGCAAAGGCC TGGCCGACCA GCTTTACCAG
CAACTGCGCG ACGGTATCGA CAGCGGCCAC CTGGCCGCCG GTACCCAACT GCCGCCCACC
CGTCTGCTGG CTGAGCAACT GGGCGTATCG CGCAAGACAG TGGCCGAGGC CTATTCGCGG
CTGACCTACG ATAACCTGCT CAGCGGCGTG GTCGGCCGTG GCACATTCGT CACCCCGCGC
CATCCGCTGC GCAGTAACGA ATCAGCCACC ATACCCCTGG CTGGCGCCGC CTCCCTCGAG
CGCTGGCAGC AGCGCGCCAC CGTGCTCAGC CAACGCCAGG TGCAGGCGCC ATCGCGCTAT
GACTTCGTCG GTGGTGCTTC GAGCAAGGCA CAGTTCCCCT TCGACCAGTG GCGCAGTTGC
CTGAACTACG CACTGCGCCG CAGCCAGCGC CACCCCGAGC GCCAATTCCC GGCCCAGGGC
TTGCCGGAAC TGCGCGAAGC CATTGCCCAC CACATCGCCT ACTCGCGCGG GGTGCACTGC
AGCGCAGCCG ACCTGCTGGT GTGCAACGGC GCCCAGCAGG CGCTGGACCT GATCGCCCGA
GTGCTGGTCG AACCGGGCTG CCAGGTGGCC ATGGAAGATC CTGGCTACCC GCCGGCACGG
CAATTGTTCC TGGCCCTGGG GGCACGCCTG CAATCGGTGC CGGTGGACGA TGAGGGCCTG
TGCGTGGAAC AGATCGCCGA CGGCACCCGG CTGATCTACG TCACCCCCTC GCACCAGTTC
CCGCTGGGCA TGCCGATGAG CGAGCCACGC CGGCATGCCC TGCTTGCGCG CGCCGCCGAG
CTGGGTGCAC TGATCATCGA AGACGACTAC GACTGTGAGT TCCGCTACCA TGGGCCAGCC
TCGGACGCGC TGCAGCGTCT GGACCGGCAT GGGCTGGTCG CCTATGTCGG GACCTTCTCC
AAGACTTTGC TGCCCGAGCT GCGCCTGGGC TATGCCGTAT TACCGCCTGC CGTACTGCAG
GCCGCTTGCG TGGCCAAGCA CCTTAGCGAT TGGCACAGCC CTACCCTGCT GCAGTGGGCG
CTGGCGCGCT TCCTTGGCGA AGGCCACCTG AACAAGCACA TCCGCCGCTG CCACGAGGTC
TACAGCGCAC GCCGCGAGCG CATCCTGGCG CGCCTTGGCG GCGATCTGGC ACCGTGGTTC
AGCGCCATCC CCGCCAGCGC AGGCTTCCAC CTCAGTGCCT TGGCTACCCC CGCAGTGGAT
GTGGAACTGT TGGCCAACCT CGCGCGCAAG GTAGAGGTCG GCCTGTATTC ACTGGCCCCC
TTCTTCAGCG AGGCGCCGGT CCGCCCGGGG CTATTGATGG GCTTCGGCGC CATCGAACTG
CTGGACATCG ACCCGGCGCT GGACCGGGTA CGCGATACCC TGCAACGCCT CAGTTGA
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| Protein sequence | MTSPESQPIR YPEQSSAPDP PMELHIRLEG RKGLADQLYQ QLRDGIDSGH LAAGTQLPPT
RLLAEQLGVS RKTVAEAYSR LTYDNLLSGV VGRGTFVTPR HPLRSNESAT IPLAGAASLE
RWQQRATVLS QRQVQAPSRY DFVGGASSKA QFPFDQWRSC LNYALRRSQR HPERQFPAQG
LPELREAIAH HIAYSRGVHC SAADLLVCNG AQQALDLIAR VLVEPGCQVA MEDPGYPPAR
QLFLALGARL QSVPVDDEGL CVEQIADGTR LIYVTPSHQF PLGMPMSEPR RHALLARAAE
LGALIIEDDY DCEFRYHGPA SDALQRLDRH GLVAYVGTFS KTLLPELRLG YAVLPPAVLQ
AACVAKHLSD WHSPTLLQWA LARFLGEGHL NKHIRRCHEV YSARRERILA RLGGDLAPWF
SAIPASAGFH LSALATPAVD VELLANLARK VEVGLYSLAP FFSEAPVRPG LLMGFGAIEL
LDIDPALDRV RDTLQRLS
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