| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2010 |
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| Symbol | |
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| ID | 5193875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2272124 |
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| End bp | 2273212 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586468 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001267334 |
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| Protein GI | 148547232 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.55186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAAA GCGATTCAGT CGCCGTGTAC TTCCTCAACG CCATGCTCCA CGCCCTGCGC
GACACGCCCG CCGAGCGTGA TGCCCAGCTG CGTGCGGTGG GCATTGCCCC GCAGCTGCTC
GATCAGCCTC AGGCGCGGGT GCCGGCCAAG GCGTTCGCCC AGCTGTGGCT GGCGTTGATC
CAGCGCCTGG ACGATGAGTT CTTTGGCCTC GACAGCCACG GCATGCCGCT GGGCAGTTTT
GCCCTGATCT GCCGGGGTTT GATCCTCGAG CCGAACCTGG AAAAGGCCTT GCGCCAGTGC
ATGGGGGGCT TCGGCCTGTT CCTGCGTGAC CTGCGTGGCA GCCTGACGGT ACGTGGCGGG
CGGGCGCTGA TCAGCGTGCA GTCGAACATT GCCGACCCTT TGACCCGGGT CTATGCCGAG
GAAACCTACC TGGTGCTGAT GATCGGCATG CTGTGCTGGC TGGCCGGGCG GCGGATTGCC
ATCGACCGCA CGGAGCTCGC GGTGTCGCGC CCGGCCCAGG AGGACGACTT GCTGCTGTGG
GGGCCGGACC TGCGCCTGGG CAGCGGACGC ACCGAGGTGG AGTTCGACAG CGCTTACCTG
CGCCTGCCGG TGGTGCAGGA CCGAGCCGCT TTGCAGACCT TCCTGCGCAG TGCGCCACAG
GGCCTGGTGA TCCGCTTTCG CAATCAGAAC GGGCTGGTGG CTGAGGTGTA TCGGCACCTG
CGGGCATTGC GCTATGGACA GTGGCCGACA TTGGCCGCGC TGGCGCAGCA GCAGGGGGTC
AGTGCCAGTA CCTTTCGCCG GCAGTTGGAG CGGGAGGGTC GTTCGTACCA GCAGATCAAG
GATGAAGTGC GCCGGGCCAT GGCCTTCGAG CGGCTGCGCG AAGGCGCGTT GAGCATTGCC
GAAATTGCCG AGCAGGCGGG GTTTCAGGAA CCGAGTGCCT TCCACCGGGC GTTCAAGAAG
TGGACCGGGC AGAGCCCAGG AAGCTACCGG GCGCGGCTGG CCGGCCTGCG TTCTACCTGT
GGGAGCGGGC ATGCCCGCGA AGAAACCAAC GCGGTGGATG GCACCGGCTC TGCCGGTGTT
CGCGGGTAA
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| Protein sequence | MRESDSVAVY FLNAMLHALR DTPAERDAQL RAVGIAPQLL DQPQARVPAK AFAQLWLALI
QRLDDEFFGL DSHGMPLGSF ALICRGLILE PNLEKALRQC MGGFGLFLRD LRGSLTVRGG
RALISVQSNI ADPLTRVYAE ETYLVLMIGM LCWLAGRRIA IDRTELAVSR PAQEDDLLLW
GPDLRLGSGR TEVEFDSAYL RLPVVQDRAA LQTFLRSAPQ GLVIRFRNQN GLVAEVYRHL
RALRYGQWPT LAALAQQQGV SASTFRRQLE REGRSYQQIK DEVRRAMAFE RLREGALSIA
EIAEQAGFQE PSAFHRAFKK WTGQSPGSYR ARLAGLRSTC GSGHAREETN AVDGTGSAGV
RG
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