Gene Pput_2002 details

Gene Information

• Locus tag: Pput_2002
• ID: 5195293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 2262767
• End bp: 2266234
• Gene Length: 3468 bp
• Protein Length: 1155 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640586460
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_001267326
• Protein GI: 148547224
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.00831305
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATTCAAG CAGCCTCGAT GGACCAGCGA AGCTTTCGCA AGCTGTTGAG CCGTAACATC 
GGCCTTCCCC TGGGGGTTGG CCTGCTGGGG GCCGTGGCCT TCGTCGCGGT GATCAACTAC 
CTGCTTTCGG CCATGCAGTG GGTCGAGCAC ACCGACCGGG TGATCGGCAA TGCCAACGAA 
ACGGTCAAGC TGTCAATCGA CATGGAAACG GGCATGCGCG GCTTCCTGAT CACGGGCGAC 
GAGCGCTTCC TTGACCCTTA CGAGGTGGCC AAGCCACGCA TTCTCGGCAG CCTGCAAAGC 
CTGCGCAGCA TGGTCGAGGA CAACCCGCAG CAGGTTGACC GTATTGACCG GCTGATGGCC 
TTGCAGCGGG CCTGGAACGA CTTCGGTAAC GAGATGATCA GCCTGCGCCG CAGCCAGGGC 
GATTACCAGG CCTCGATCGG CAATGGCCGG GGCAAGTGCA TCACCGATGA AATCCGCAAG 
GAGTTCGATG ACCTGATCAT TACCGAACAA CAACTGCGCA TGGCCCGTAA CGAAAAAGTC 
AGTGCCGTCA CCGTGACGGC GATTTCGGCT TTCGTGCTGT TCATTGTCGG CCTCAGTGCA 
TTGCTGGCTT ACCTGGGCCG TCGTGACCTG CTGGCACTTT CGGCCAACTA CGCTGAAAAC 
CTGCAAGCCC AGCAACGCTC GGCGCAGCGC CTGGAGCACC AGGCCTGGTT GCGCACCGGC 
CAGACCCAGC TGGCGCAGCA GGTGCTCGGG CAACTGACCT TGCCCATGCT TGGCGAGAAC 
ATTCTGCGCT TCTTTGCCTC TTATCTGGGC AGCGTGGTGG GCGCCGTGTA CGTGCGCGAC 
GAGCATGGCC GGCTGGTGCG CGTGGCCTGT TATGGCCTGA GTACCGAAGA GCAGGCCCGT 
GAGCAGATCG AGTCGGATCA CCATGGCCTG TTGGCCCAGG CGGTCCGCGA AGGCCGCTTG 
CTGCGCCTGG AGGAACTGCC CGAAGATTTC TATCGCCTCA GTTCCGGCCT GGGCAGTGGC 
TTGCCGCGCA GTGCATTGCT GATGCCGGCG ACCGAAGACG GGCAGATCAA CGGGGTGATC 
GAGCTGGGTT TCCTGCGCCC CTTGCAAGAA CGGGATGAAG AGCTGCTGGA GCGGGTCGGC 
GGCAACCTGG GCATGTCGAT CGAGAGCGCC CGTTATCGTC AGCGCCTGCA GGAAGTGCTG 
GCCGAAACCC AGCAACTCAA TGAAGAGCTG CAGGTGCAGC AGGAAGAACT CAAGACTGCC 
AACGAAGAGC TCGAAGAGCA GTCACGGGTG CTCAAGGAGT CTCAAGCCCA TCTGGAAACC 
CAACAGGCCG AACTCGAGCA GACCAACGAG CAGTTGTCGG AACGCACCGA TGCGCTGGAC 
CGCAAGAACG ATGAGCTGAG CCAGGCGCAG CTGGAGCTGC AGGCCCGTGC CGACGACCTG 
CAGCGATCGA GCAAGTACAA GTCCGAATTC CTCGCCAACA TGTCCCATGA GCTGCGCACG 
CCGCTCAACA GCTCGCTAAT CCTGGCCAAG TTGTTGGCTG AGAACGGTGA AGGCAACCTC 
AGTGAGGAGC AGGTCAAGTT CGCCGAATCC ATCTACTCGG CCGGTAACGA TCTGCTCAAC 
CTGATCAACG ACATTCTCGA TATCGCCAAG GTCGAGGCCG GCAAGCTTGA AGTACGGCCC 
GAGACCACCC AGGTCGAGCG CCTGGTCGAA GGCTTGCGCG GCATGTTCCA GCCGCTTGCC 
GGTCACAAGG GGCTGGCCTT CGAGGTCAAG GTCGAGCCGC AGGTACCGGT CACGCTGTTC 
ACCGACCGTC AGCGCCTGGA GCAGATCCTC AAGAACCTGC TGTCCAACGC CATCAAGTTC 
ACCGAGCGTG GTCAGGTCAG CATGAACGTC AGCTTCCAGG CTGGCAGCGG TATCGTGTTC 
GCAGTCCGTG ACACCGGCAT CGGCATTGCG GCCGATCAGC AGCAGGCGAT CTTCGGCGCC 
TTCCACCAGG TCGATGGCAC CAGTAATCGC CGCTATGGTG GTACTGGCCT GGGGCTGTCG 
ATCTCCCGTG ACCTGGCGCA TTTGCTCGGT GGCCAGATCA ATGTCGAAAG CAGCCCTGGG 
CAAGGCAGCG TGTTCAGCCT GATTCTGCCG GAGCGCTACG CCGCCGAGGC CGAAGACGTC 
GAGCCGCAAA GCCTGCGCCC GGCCGTCGAT GCGTTGCCGC CCGCACCGCA AGCGCCGTTG 
GCCGCCGCTG TCATGCGCCC GGCGCCGGCC TTTGCCGACG ACCGCGAGCG GGCCCCTTTC 
GATACCCGTT GCATTCTGGT GATCGAAGAC GAGCCCAACT TTGCCCGCAT CCTCTTCGAC 
CTGGCCCATG AGCTGGGCTA TAGCTGCCTG GTGGCCCATG GCGCCGACGA AGGCTTCGAG 
CTGGCAGCCC AGTACATTCC GGATGCGATC CTGCTGGACA TGCGCCTGCC CGACCACTCG 
GGCCTGACCG TCCTGCAGCG CCTCAAGGAG CAGGCCAGCA CCCGCCATAT CCCGGTGCAC 
ATCATTTCGG TTGAAGACCG CGTCGAGGCG GCCATGCACA TGGGGGCGGT GGGGTATGCG 
GTCAAACCCA CCAGCCGCGA GGAGCTCAAG GAGGTGTTCG CTCGCCTGGA AGCCAAGCTT 
ACGCAAAAGC TCAAGCACAT CCTGCTGGTG GAAGACGACG ACCTGCAGCG CGAGAGCATC 
GCCCGGCTGA TCGGCGACGA CGATGTCGAG ATCACGGCCG TGGCCATGGC CCAGGATGCC 
CTGGCGCTGT TGCGCCAGAA CATCTACGAC TGCATGATCA TCGACCTCAA GCTGCCAGAC 
ATGCTCGGCA ACGAGCTGCT CAAGCGCATG ACCGCCGAGG ATATCCGCGC CTTCCCGCCG 
GTGATCGTGT ATACCGGCCG CAACCTCACC CGCGAGGAAG AAGCCGATCT GCTCAAGTAC 
TCACGCTCGA TCATCATCAA GGGCGCACGT TCGCCGGAGC GCCTGCTCGA CGAAGTGACG 
CTGTTCCTGC ACAAGGTCGA ATCGCAGCTG TCCAACGAGC GTCAGCGCAT GCTCAAGACC 
GCGCGCAGCC GCGACAAGGT GTTCGAGGGC CGCAAGGTGC TGCTGGTGGA TGACGATGTG 
CGTAATATCT TCGCCCTGAC CAGTGCCCTG GAGCACAAGG GCGCCATTGT CGAAATCGGC 
CGCAACGGGC GCGAAGCCAT CGAGCGCCTG GAGCAGCACG ACGACATCGA CCTGGTGCTG 
ATGGACGTGA TGATGCCGGA GATGGACGGC TTCGAGGCCA CGCGGCTGAT CCGCCAGCAA 
CCGCGCTGGC GCAAACTGCC GATCATCGCC GTGACCGCCA AGGCCATGAA GGATGACCAG 
CAGCGTTGCC TGCAAGCCGG TGCCAATGAC TACCTGGCCA AGCCGATCGA CCTGGACCGC 
CTGTTCTCGT TGATCCGTGT CTGGCTGCCG CAACTGGAGC GAATTTGA 

 

Protein sequence

MIQAASMDQR SFRKLLSRNI GLPLGVGLLG AVAFVAVINY LLSAMQWVEH TDRVIGNANE 
TVKLSIDMET GMRGFLITGD ERFLDPYEVA KPRILGSLQS LRSMVEDNPQ QVDRIDRLMA 
LQRAWNDFGN EMISLRRSQG DYQASIGNGR GKCITDEIRK EFDDLIITEQ QLRMARNEKV 
SAVTVTAISA FVLFIVGLSA LLAYLGRRDL LALSANYAEN LQAQQRSAQR LEHQAWLRTG 
QTQLAQQVLG QLTLPMLGEN ILRFFASYLG SVVGAVYVRD EHGRLVRVAC YGLSTEEQAR 
EQIESDHHGL LAQAVREGRL LRLEELPEDF YRLSSGLGSG LPRSALLMPA TEDGQINGVI 
ELGFLRPLQE RDEELLERVG GNLGMSIESA RYRQRLQEVL AETQQLNEEL QVQQEELKTA 
NEELEEQSRV LKESQAHLET QQAELEQTNE QLSERTDALD RKNDELSQAQ LELQARADDL 
QRSSKYKSEF LANMSHELRT PLNSSLILAK LLAENGEGNL SEEQVKFAES IYSAGNDLLN 
LINDILDIAK VEAGKLEVRP ETTQVERLVE GLRGMFQPLA GHKGLAFEVK VEPQVPVTLF 
TDRQRLEQIL KNLLSNAIKF TERGQVSMNV SFQAGSGIVF AVRDTGIGIA ADQQQAIFGA 
FHQVDGTSNR RYGGTGLGLS ISRDLAHLLG GQINVESSPG QGSVFSLILP ERYAAEAEDV 
EPQSLRPAVD ALPPAPQAPL AAAVMRPAPA FADDRERAPF DTRCILVIED EPNFARILFD 
LAHELGYSCL VAHGADEGFE LAAQYIPDAI LLDMRLPDHS GLTVLQRLKE QASTRHIPVH 
IISVEDRVEA AMHMGAVGYA VKPTSREELK EVFARLEAKL TQKLKHILLV EDDDLQRESI 
ARLIGDDDVE ITAVAMAQDA LALLRQNIYD CMIIDLKLPD MLGNELLKRM TAEDIRAFPP 
VIVYTGRNLT REEEADLLKY SRSIIIKGAR SPERLLDEVT LFLHKVESQL SNERQRMLKT 
ARSRDKVFEG RKVLLVDDDV RNIFALTSAL EHKGAIVEIG RNGREAIERL EQHDDIDLVL 
MDVMMPEMDG FEATRLIRQQ PRWRKLPIIA VTAKAMKDDQ QRCLQAGAND YLAKPIDLDR 
LFSLIRVWLP QLERI