Gene Pput_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1998 
Symbol 
ID5194790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2259271 
End bp2259675 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID640586456 
Producthypothetical protein 
Protein accessionYP_001267322 
Protein GI148547220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.989293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000130496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGTCA CGCCCTGCCA CGACCGACGT ACAGGAGTGA TTACAGTGTC CAGACTTGCA 
GAGTTTCGTG CTGCCGAAAA AGCGCTCCAG GAACAGATGG CGCAACTGGA AGCGTTGAAA
AAGGATGCCG GCCTCAAACG CGAAATCGAA TTCGAGCAGA AACTAGTCGG CCTGATGAAA
AGCTATGACA AGAGCCTGCG CGATATCATC GCCATCCTCG ACCCGAAGGC TGTGGCCCGC
GCTTCCAGCA CACCCCCCAA GCAACAACGC CGCCCGCGGG TGGTCAAGGT CTATCAGAAC
CCGCACACCG GCGAACGCAT CGAGACCAAA GGCGGCAACC ACCGCGGCCT CAAGGCCTGG
AAAGAACAAT ATGGGGCCGC CACGGTAGAA AGCTGGGTAC GCTGA
 
Protein sequence
MFVTPCHDRR TGVITVSRLA EFRAAEKALQ EQMAQLEALK KDAGLKREIE FEQKLVGLMK 
SYDKSLRDII AILDPKAVAR ASSTPPKQQR RPRVVKVYQN PHTGERIETK GGNHRGLKAW
KEQYGAATVE SWVR