Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1998 |
Symbol | |
ID | 5194790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2259271 |
End bp | 2259675 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640586456 |
Product | hypothetical protein |
Protein accession | YP_001267322 |
Protein GI | 148547220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.989293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000130496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGTCA CGCCCTGCCA CGACCGACGT ACAGGAGTGA TTACAGTGTC CAGACTTGCA GAGTTTCGTG CTGCCGAAAA AGCGCTCCAG GAACAGATGG CGCAACTGGA AGCGTTGAAA AAGGATGCCG GCCTCAAACG CGAAATCGAA TTCGAGCAGA AACTAGTCGG CCTGATGAAA AGCTATGACA AGAGCCTGCG CGATATCATC GCCATCCTCG ACCCGAAGGC TGTGGCCCGC GCTTCCAGCA CACCCCCCAA GCAACAACGC CGCCCGCGGG TGGTCAAGGT CTATCAGAAC CCGCACACCG GCGAACGCAT CGAGACCAAA GGCGGCAACC ACCGCGGCCT CAAGGCCTGG AAAGAACAAT ATGGGGCCGC CACGGTAGAA AGCTGGGTAC GCTGA
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Protein sequence | MFVTPCHDRR TGVITVSRLA EFRAAEKALQ EQMAQLEALK KDAGLKREIE FEQKLVGLMK SYDKSLRDII AILDPKAVAR ASSTPPKQQR RPRVVKVYQN PHTGERIETK GGNHRGLKAW KEQYGAATVE SWVR
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