| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1991 |
|---|
| Symbol | |
|---|
| ID | 5193094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2255116 |
|---|
| End bp | 2255985 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586449 |
|---|
| Product | putative phage repressor |
|---|
| Protein accession | YP_001267315 |
|---|
| Protein GI | 148547213 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000855833 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000527672 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACAT TTAGCAGCAA GCTAAACACT GGCATGCTTC ACCCCATGGA CATCTACCAA
ATTCGCAAGC ACAACCTGGT GAAACTGATC GGCAGCCAGA GAAAGGGCAC CTGCGCAGAG
CGCTGGGGGA TGGCGCCTGC ACACCTTAGC CAGATCCTTT CCGACAAGAC CGTGAAAAAC
CTGGGCGATG ACGTGGCCCG CCGCATCGAG GGCATCGAAG GTTTGCCACG GGGCTGGTTC
GACGCGCTGT CGCCAGGCGA ACACGCACAG GCGGCTGTCG AGCCAGGTGA CAACAAGCTC
TCTGCAGCCG ACCTGGTCAA ACAGATGCTT GCCCGAAGCG GCAAAGGTAT CGCTGAAGAA
ACCCGGCAAA GGCTGCTGGC TGCGGCGCAA GAGCCTGCAG ATGCCACGCT GCTGGAAGCC
GAGCCGCTGC GCCCCGGCCT GGTCGGTGAC GAAGTGTGGA TTGCCCACTA TGACGTGCGG
GCAGCCATGG GCGGCGGCCA GATCCCCCAC GACTACCCCG AGATGTTCAA GGACGTTCGC
GTCAGCCCCA GCCACCTGCG CGAACTGGGC GTGACGTTCA GCGAGCACCA TCACCTGAAG
ATGGTGACCG GCTGGGGCCA ATCGATGGAG CCGACCATCA GGCACCGCGA CCCGCTGATC
GTCGACGTCA GCATCCGAGA GTTCGTCGGC GATGGCATCT ACTTCTTTTC CTGGGGCGAC
CACATCTACA TCAAGCGGCT ACAGATCGCG GACGAGGACC ACTTCGAGAT GATCTCCGAC
AACTCGCGGC ACAAAGACCG CATGATTCGT CGGGAAGAGA CCTACATACA GGCCAGGGTC
CTGCTGGTGT GGAATGCCCA CCTTGTATAA
|
|---|
| Protein sequence | MRTFSSKLNT GMLHPMDIYQ IRKHNLVKLI GSQRKGTCAE RWGMAPAHLS QILSDKTVKN
LGDDVARRIE GIEGLPRGWF DALSPGEHAQ AAVEPGDNKL SAADLVKQML ARSGKGIAEE
TRQRLLAAAQ EPADATLLEA EPLRPGLVGD EVWIAHYDVR AAMGGGQIPH DYPEMFKDVR
VSPSHLRELG VTFSEHHHLK MVTGWGQSME PTIRHRDPLI VDVSIREFVG DGIYFFSWGD
HIYIKRLQIA DEDHFEMISD NSRHKDRMIR REETYIQARV LLVWNAHLV
|
|---|
| |