| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1989 |
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| Symbol | |
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| ID | 5193082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2253845 |
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| End bp | 2254519 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586447 |
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| Product | alginate lyase 2 |
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| Protein accession | YP_001267313 |
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| Protein GI | 148547211 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0130582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000160106 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGTAG ATATCAGCCA CCTCACCATC GCCACGCCGG TAGCCGTCTC CTCAACCAAC
CCCGTTGCTC TGGAGCTGAA CGGTGCTGAA GCGATTGCCC GCTTTCCCAG CATCGTGACG
GTGCTCAGCG ATGGCTCGAT CCAGTTCTCA GCCCCAACCA AAGGTGCTTC GAGCAAAAGT
ACCCACAGGA CACGCTGCGA ATGGACAGAA ACGCAAGACT GGACGCTGGC CAGCGCCCAG
GATCACTGGA ATCGCCAGAC CATGACGCTG ACCAAGGTCA ACTCGGCGCA GAAGGTGGTC
ATCGCCCAGA TGCACGTACG CGGGGACGAC GGCCCGCCGG TAAAGGTGTT CTGGAACAAG
GGCAACATCA CCCTGGGGTT TCGGCGCACC TTCAACCAGA CCGACCCGGT GAATTCCACA
GTCCTGAAGG GGGTGCCACT GGGTGCGACG TTCCACATCA GCATTCACAC CACGTCTGAA
GGCGTGGTAA CCGTGACGGC CGAATGCAAC GGGGTATCCG CCTCGTCGGG CGATTTGCAG
CTCGACAGTA CCTGGGCTTC GCACCTGTTC GAGTTCCACG GCGGGGTTTA CAACCAGGTC
GACTACACCG ACGCAACCCC CGCCGAGGAC GGCTCGATCT GCATCATCAG CGAGCTCTCG
CTTATCCACC GCTGA
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| Protein sequence | MAVDISHLTI ATPVAVSSTN PVALELNGAE AIARFPSIVT VLSDGSIQFS APTKGASSKS
THRTRCEWTE TQDWTLASAQ DHWNRQTMTL TKVNSAQKVV IAQMHVRGDD GPPVKVFWNK
GNITLGFRRT FNQTDPVNST VLKGVPLGAT FHISIHTTSE GVVTVTAECN GVSASSGDLQ
LDSTWASHLF EFHGGVYNQV DYTDATPAED GSICIISELS LIHR
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