| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1972 |
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| Symbol | |
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| ID | 5191462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2238437 |
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| End bp | 2239630 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586433 |
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| Product | peptidase |
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| Protein accession | YP_001267299 |
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| Protein GI | 148547197 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0508979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAA CACCGAAAAA ATCCAAATCC AAGCTGTGGT TCCTGGTCCA CAGCTGGCTC
GCCTTGCCGA TCTGGTTCTT TGTCCTGATC GTCTGCTTCA CCGGCATGCT CGCCGTGGTC
AGCCAGGAAA TCGTCTGGCT CGCCGATCCG GCTGTGCGCG CCAACAAGCC AGACGCAGAC
ACCGAGCGCA TGAGCTTTCA GCAGGTACTG GAGGCCTTGA ACAAGGCCGA GCCGGACATG
GTGGTGGAAC GCCTGAGCCA GCCAGATGGT TCGCACTTCG CGGTGAAAGC CAATGTCACA
CTGCCTGACG GCACCAGCCC GACGCTGTAT GTAAACCCCT ACACCGGAAC CATTCAGGGC
AAGACCCCGG ACTTCAACTT CGAAGCCTTC ACCCGCGCCC TGCACGGCTG GTGGCTGGTG
CCGTTCACCA ACGGTTTCAG CTGGGGCTGG TACCTGGTCT CGCTGCTCGG CCTGCCGATG
CTCGCCTCGC TGGTCACCGG CCTGGTGGTT TACAAGAAGT TCTGGAGAGG CTTTTTCAAA
CCCGTGCGTA CCGGCCATGG TTCGCGAATT TTCTGGGGTG ACCTGCACCG TCTGTCCGGG
GTGTGGTCAA TCTGGTTCAT TGCGGTCATT TCCGTCACCG GCACCTGGTT CCTGATCCAG
GCGATCCTGT CCGACAACCA CATCACCCTT TCCAGCCAGC CCATCGTGCC GGTGATCGCC
CGTGAGGAAG TGCCACAAAC GCCAGATGGC AGCCCCGCCT CGCGCATCGA CCTGGATGAG
GCGGCACGCC TTGCCGGGCT GGCGATCCCG GGGCTGGAAG TGACCTCCAT CTCGCTCCCC
GCCACTGCCT ACAGCCACGT CATGCTGTCT GGCCCGGGCT GGTACCCGTT GATGTTCCAG
AGTGCGTCGG TCAATCCGTA CACACGCAAT GTCGACAGCC AGTTCCTGAT CAGCGACCGT
TCGGCCCTGG AGTTCGTCAC CGAGTCCATG CGCCCGCTGC ACACCGGCGA CTTTGGCGGT
TTGCCGATCA AGCTGGTGTG GTTCTTCTTC GGCCTGATCC TCACCCTGAT GGTGCTCAGC
GGCCTGCTGA TCTGGACCAA GCGCACCGCC CAGGCCACCG CCGCGGCCCT CAAGCGCAGC
GAGCGCGCTC CGCGTGCAGT ACACAGTGAA ACCACCGTGG AGATCCATTC ATGA
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| Protein sequence | MAQTPKKSKS KLWFLVHSWL ALPIWFFVLI VCFTGMLAVV SQEIVWLADP AVRANKPDAD
TERMSFQQVL EALNKAEPDM VVERLSQPDG SHFAVKANVT LPDGTSPTLY VNPYTGTIQG
KTPDFNFEAF TRALHGWWLV PFTNGFSWGW YLVSLLGLPM LASLVTGLVV YKKFWRGFFK
PVRTGHGSRI FWGDLHRLSG VWSIWFIAVI SVTGTWFLIQ AILSDNHITL SSQPIVPVIA
REEVPQTPDG SPASRIDLDE AARLAGLAIP GLEVTSISLP ATAYSHVMLS GPGWYPLMFQ
SASVNPYTRN VDSQFLISDR SALEFVTESM RPLHTGDFGG LPIKLVWFFF GLILTLMVLS
GLLIWTKRTA QATAAALKRS ERAPRAVHSE TTVEIHS
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